\name{expression_arraywide} \alias{expression_arraywide} \alias{replicate_arraywide} \title{ Generate expression for a whole array} \description{ Generate expression values for a whole array } \usage{ expression_arraywide(n, noise_mean = 50, noise_sd = 5, signal_mean = 500, signal_sd = 0.9, highbump_percent = 5, highbump_mean = 6000, highbump_sd = 500) replicate_arraywide(x) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{n}{ Number of probes } \item{x}{ A vector of expression values } \item{noise_mean}{ Mean for the noise } \item{noise_sd}{ Standard deviation for the noise} \item{signal_mean}{ Mean for the signal } \item{signal_sd}{ Standard deviation for the signal } \item{highbump_percent}{ Percentage of probes from the `high bump' } \item{highbump_mean}{ Mean } \item{highbump_sd}{ Standad deviation } } \details{ XXX } \value{ A vector of numerical values (and of length \code{n}, or \code{length(x)})) } %\references{ ~put references to the literature/web site here ~ } %\author{ ~~who you are~~ } %\note{ ~~further notes~~ % % ~Make other sections like Warning with \section{Warning }{....} ~ %} %\seealso{ ~~objects to See Also as \code{\link{help}}, ~~~ } \examples{ y <- expression_arraywide(1000) y2 <- replicate_arraywide(y) library(lattice) densityplot(~ c(y, y2), groups = rep(c(1,2), rep(length(y), 2))) } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ manip }