\name{arcsinhTransform} \alias{arcsinhTransform} \title{Create the definition of an arcsinh transformation function (base specified by user) to be applied on a data set } \description{Create the definition of the arcsinh Transformation that will be applied on some parameter via the \code{transform} method. The definition of this function is currently x<-asinh(a+b*x)+c). The transformation would normally be used to convert to a linear valued parameter to the natural logarithm scale. By default a and b are both equal to 1 and c to 0. } \usage{ arcsinhTransform(transformationId="defaultArcsinhTransform", a=1, b=1, c=0) } \arguments{ \item{transformationId}{character string to identify the transformation} \item{a}{positive double that correponds to the base of the logarithm. } \item{b}{positive double that correponds to a scale factor.} \item{c}{positive double that correponds to a scale factor} } \value{ Returns an object of class \code{transform}. } \author{B. Ellis} \seealso{ \code{\link{transform-class}}, \code{\link{transform}}, \code{asinh} } \examples{ samp <- read.FCS(system.file("extdata", "0877408774.B08", package="flowCore")) asinhTrans <- arcsinhTransform(transformationId="ln-transformation", a=1, b=1, c=1) dataTransform <- transform(samp,`FSC-H`=asinhTrans(`FSC-H`)) } \keyword{ methods }