c66e2e27e6a89a554b4d38cbdbf1d922 *DESCRIPTION
35112cc0a4a20c2c6df8b4949e116838 *LICENSE
af05c503f9412c5016fa4c7176c7a197 *NAMESPACE
6913750396c3930c6f495cd540134861 *NEWS
5b3a9f616d087c493bd22995afc5ff88 *R/CRC_abd-data.R
3046a281401cfe394520b0c60f52f690 *R/CRC_meta-data.R
bf18e11bc8a72dc761d8769637a48fd6 *R/adjust_batch.R
e917e59461ee1f1b482d9824ae74be49 *R/continuous_discover.R
febebdc00c01ae3cf62173e58cbada13 *R/controls.R
a47950c3f7ee299b62ca61f1ce30fa1e *R/discrete_discover.R
9067bbf5e15fd369f142a1d789056167 *R/helpers.R
693fab7a639c3b900c198ef7675f5038 *R/helpers_adjust_batch.R
d118b98b571974aae311cf46a9e11645 *R/helpers_continuous_discover.R
0607bd533d0c023fdbf784b93208ffcb *R/helpers_discrete_discover.R
a8cab6c91a488b60e8ef73e963837455 *R/helpers_maaslin_meta.R
03a3df4653f7b74a609f58f8e8642097 *R/maaslin_meta.R
11f24451d5d7953e775d9cbf8120c256 *R/vaginal_abd-data.R
b607a8fb0837b77d376345d198d924f6 *R/vaginal_meta-data.R
a11adbd01282395641ea6f1b663b558b *R/vignette_prep.R
8ca1b605f3e8effd10cb376942e1463b *build/vignette.rds
98e284d09831d766fa1f7f588aa2948e *data/CRC_abd.RData
47607cfd265889e9214a9d016e780342 *data/CRC_meta.RData
a42d792d27d9503f6f8ecb00a076ad0c *data/vaginal_abd.RData
6b41e2f7ad73352ed7640c7345ca119d *data/vaginal_meta.RData
218ed3de7b0804b25156e02ef31307e2 *inst/doc/MMUPHin.R
54e77d216080e5e8896812180cc426e5 *inst/doc/MMUPHin.Rmd
dad1810a101a67f9fa84c69084be9e1a *inst/doc/MMUPHin.html
879143165ed1123b5082b2d4a38e33e6 *man/AST.Rd
e4268f9755b5ed101b27b8524323ddf9 *man/CRC_abd.Rd
c14bb01dd549b551267f2dbfde749960 *man/CRC_meta.Rd
2101ed5816c7167dc6540b7a641267c0 *man/LOG.Rd
4283fa957168dd59fb434d31eea35037 *man/Maaslin3_wrapper.Rd
956f63bf7fe16f737f61959e83d2999d *man/add_back_covariates.Rd
0349fb2ccefffcbe0ec77dd046b4930f *man/adjust_EB.Rd
f7a9eab0f72660c55cf849c5041ea4a7 *man/adjust_batch.Rd
15d7ecaf2d594055c0af95b2a94cd46e *man/aprior.Rd
c6974a149754cf59debabfdb75a635cb *man/back_transform_abd.Rd
bc3ca1d0c80ee55d0cce3421369cdcff *man/bprior.Rd
e64e5317a50088e7f3694b4455c5bb04 *man/catchToList.Rd
e2c3759263fe3e44629a6ca0d2b5c3dd *man/check_D.Rd
c2dbeed71c956ed4c30807b7d483e7ae *man/check_batch.Rd
da08140c4f542d8c2cb85ce0bad7ded5 *man/check_covariates.Rd
7a413f606f47217525a4d27b9842320b *man/check_covariates_random.Rd
7362f02f11a737ebeb293edf51b78d3c *man/check_exposure.Rd
8e62f2d59daca54878c79e79f6151a1d *man/check_feature_abd.Rd
bf9c4d4730cf703a4bfb291d6fc383fb *man/check_metadata.Rd
892ea4167c977ffdab236f25415c0ab2 *man/check_options.Rd
0a2ae69844b479f136420d022c644518 *man/check_options_continuous.Rd
15038a8e22679216a34f533e731d6ca2 *man/check_pseudo_count.Rd
8037da0641b19ac592d9a1b0f58ce636 *man/check_rank.Rd
7fbda048a02bba487bc1bb3d8181bff3 *man/check_samples.Rd
17191f6a4ac3e8bb8b181bd7c7c97e67 *man/check_samples_D.Rd
700ab6071d3aeb53594bfef8d54d80e1 *man/construct_design.Rd
1b18bc135d7aa29e8306e2a662bf354b *man/construct_ind.Rd
5d5eeaad0ca06157178c12f745976743 *man/continuous_discover.Rd
b9650dbc748548cbc9911d45cb4fe7c6 *man/create_table_maaslin.Rd
48564002694c7528b01e8a2a58601e51 *man/diagnostic_adjust_batch.Rd
d527834f17693e6f2535c26d6b593cd2 *man/diagnostic_continuous_discover.Rd
a4bc066a5905bf2bfd114b824a2bb804 *man/diagnostic_discrete_discover.Rd
0ac734a2539dd3532d1e1229d95430a8 *man/discrete_discover.Rd
cafab1354f74e2a3c6fb720d0d1d0b97 *man/figures/adj_batch_example.png
0808f4ce638d5995a56857a506aaa89f *man/figures/structure_types.PNG
5bdd52b65e3ae9269aff3b162cbd89c0 *man/fill_dimnames.Rd
12552fa00317c1a1e1d82684c4a893a4 *man/fit_EB.Rd
c386f1c8769c6fc353527baddd01640c *man/fit_shrink.Rd
9b076c76b8db37f58e032d5ef4812eab *man/fit_stand_feature.Rd
9ad97dc584c084005d2797c1812204d9 *man/it_sol.Rd
b61797c27e005f5ca6a948fb2688021c *man/maaslin_meta.Rd
4fc07016464653809a04975b0736325c *man/match_control.Rd
6ff3ba43141783441e237210b79bc32d *man/normalize_features.Rd
71d7e6396fce8f0bc76933878b51ed9f *man/relocate_scale.Rd
a572752d406b3be60883fe53db14b41e *man/rename_maaslin.Rd
4f8bfca88e6503f9eca39173c9dd501d *man/rma_wrapper.Rd
309bdfc0e5f8ba0485269b122e4f8265 *man/set_pseudo.Rd
c7bd61bcd92d1f970e7da02d00cb6404 *man/shorten_name.Rd
dc14c8a47bc73e32aad09b6ea2232c3a *man/standardize_feature.Rd
af25c5bc64761807244c4dd3d95a4315 *man/transform_features.Rd
1cd90220325422b66797c647daa35f97 *man/tss.Rd
c8cd3cee6c8327299e3d317eedd083d9 *man/vaginal_abd.Rd
fd710c74743e86f24ba42a892fc205fd *man/vaginal_meta.Rd
126696555c914157952b6d702e056d64 *man/visualize_continuous_discover.Rd
1a736b10c9f4f51b19cd18ff6032089f *tests/testthat.R
7cbabf310093dc8c82bf282bdf9f67c1 *tests/testthat/test-helpers.R
3aae2c1217c2224f63525e246a1cf8be *tests/testthat/test-helpers_adjust_batch.R
efd0912dcb2f55fbfaf3db0377680fe6 *tests/testthat/test-helpers_maaslin_meta.R
54e77d216080e5e8896812180cc426e5 *vignettes/MMUPHin.Rmd
2b613d0d5a895218d8c3532878ec3a85 *vignettes/references.bib
