b9ebf390b69edef324ca285394b860d8 *DESCRIPTION
13ea8de5eb4124688bc0f5d555eacdd6 *NAMESPACE
990384b85d935e68fd5ccc492b516780 *NEWS.md
d75e835a0a83e5c3f7e610bfa987c98d *R/RcppExports.R
92c5beb64cc21b3731b5148c31b28e97 *R/fraq_code_template.R
02a509f9d771fe2bee24055b4a73f3b6 *R/fraq_mem.R
3baeeff86eb44f15c6272c226c4728f3 *R/fraq_shortread.R
85c36452a4e2b61f10d261fcbe5e0bb2 *R/function_documentation.R
2308a7a25c60fbd06f2713e977fac1da *R/generate_random_fastq.R
d6ace95a5f3fc670a91320e0988d003c *R/zzz.R
12159764379372b95c264fe2a5d3d16a *README.md
bd48d86bd1a770bc688c1a5b8c149584 *build/vignette.rds
085969dd39e951fb81a28d4c13dd8851 *cleanup
f7566d9a9c8cc6b24153b5a4c81c05ce *configure
f0d2222dd4a3238e84b73058b871b83a *configure.ac
8e7ad5295e13d7e113d80624609af962 *inst/doc/fraq_getting_started.R
45e31afe3836257c891cbb18114276f1 *inst/doc/fraq_getting_started.Rmd
f9042e8354199ec4b5c329abe9f37fb3 *inst/doc/fraq_getting_started.html
6413a61198fb05694c69b878a97bca83 *inst/include/fraq.h
9fbbaf1528e051d613df2016c344190e *inst/include/fraq_defines.h
c7f0b161edbe52f5f345a3d1311d0b32 *inst/licenses/ZSTD_BSD_LICENSE.txt
b234ee4d69f5fce4486a80fdaf4a4263 *inst/licenses/ZSTD_GPL2_LICENSE.txt
af57921e3f512f5b1dbf093ce15bde45 *man/fraq-package.Rd
3005100ac7cee9870cadf7f5162e4fa2 *man/fraq_align.Rd
2d8707adef2defb0d74acc0b592674c2 *man/fraq_chunk.Rd
6dfeff386abad3fd5dcb7ce54582b584 *man/fraq_concat.Rd
8054d016845c11a05fe11df471fcb4e7 *man/fraq_convert.Rd
3716e8d763ae4d5354ab1a912cc206e5 *man/fraq_count_barcodes.Rd
00340e7c8a3a0c3bad8b61aab5b90d71 *man/fraq_demux.Rd
5a2ca56fff01e2c61e1a66bcbb25a1df *man/fraq_downsample.Rd
10ba0a3d857f95e78ac32fdba88e0b48 *man/fraq_fifo_supported.Rd
b56bee9f98596c41779921e7298214d1 *man/fraq_mem_list.Rd
afc8536ad60e5f02817d3dd440547026 *man/fraq_merge_pairs.Rd
11f4705a063a61e75c41c95be0b03f6a *man/fraq_options.Rd
9173b5118273c5d1979d12c66a198d11 *man/fraq_quality_filter.Rd
8ddd70c168b179d64396ac5907c2a566 *man/fraq_rcpp_template.Rd
ec613f6d5e8f9bd44f92f4046f59ff44 *man/fraq_run_r.Rd
dffd3b3a4d900ba5f9b7a792f1a963b0 *man/fraq_shortread.Rd
368febddcfd675edbdf316a31028ffcc *man/fraq_slice.Rd
eb64f79bd67ebdff0a03a18eacf4f36b *man/fraq_summary.Rd
9468b2ca1da3a1fdfcdc2a7ff015087e *man/fraq_trim_adapters.Rd
e2da45e5155141cbff25ae6db033d6e3 *man/generate_random_fastq.Rd
c7f0b161edbe52f5f345a3d1311d0b32 *src/LICENSES/ZSTD_BSD_LICENSE.txt
b234ee4d69f5fce4486a80fdaf4a4263 *src/LICENSES/ZSTD_GPL2_LICENSE.txt
2c2f7bf876ad57e75173c15545604fbd *src/Makevars.in
8ce8218a9cf4277ee791953c4456e4a2 *src/Makevars.win
4bc40210600ae2ac5528b9b6f655d583 *src/RcppExports.cpp
1e4cb5eca20fdfd98f98b7dff0f0bf01 *src/ZSTD/zstd.c
db183fd2ddf785d9b318877329476ebd *src/ZSTD/zstd.h
c41245e70dc8b3520adab14d208c8b46 *src/ZSTD/zstd_errors.h
15f5dfbf97188aee55ba037db2a27acb *src/distance_functions.h
efae17cebcea84ed664ded6a7736bdbc *src/fraq_concat_graph.h
92c10632a4c707bfd6b96625abaaf82d *src/fraq_concat_serial.h
619beee30f1a254f532dc53f9199ffc7 *src/fraq_functions.cpp
640e36b6574ad4c80987e176a515bae0 *src/fraq_nthreads_guard.h
330b0d31b1c509d36c833fb54fca6146 *src/fraq_run_graph.h
489c76d3a5bc1ecf3124ea63baccf5f9 *src/fraq_run_graph_r.h
73c8a5f2c449186d99376c373437117d *src/fraq_run_serial.h
c89903a3130bec93d117d017095a5947 *src/io/fraq_format.h
5d54509a993f2cefc6bc08bd5395d7ff *src/io/fraq_readers.h
62591c62dc6f4b0c7e05c6feb364a9b9 *src/io/fraq_writers.h
519fdd83883fab183f8a1257887e3a78 *src/io/tbb_flow_compat.h
7bdd03fb883bfdde9ff13bf25783a7ff *tests/fraq_concat_tests.R
a135d2a449864d975d444685eef7f19d *tests/fraq_cpp_kernel_tests.R
ea4b51a466e40c36d28c12a48fc9639c *tests/fraq_fifo_tests.R
59dfd0723df4d7101508f51d318fd368 *tests/fraq_format_tests.R
9f0a4c05f253f27c91afcee5949d7d2b *tests/fraq_interrupt_tests.R
964c8b08ac1954d3ce6dc1ce9fb3487e *tests/fraq_prebuilt_tests.R
055f40403b29aabca433eadcc9003d8c *tests/fraq_r_kernel_tests.R
7db13f1706e22241660a0afac12e5069 *tests/fraq_serial_tests.R
eebc9c009dc27e52d6b1702b63c3b492 *tests/fraq_utils_tests.R
45e31afe3836257c891cbb18114276f1 *vignettes/fraq_getting_started.Rmd
3bfd025e3f2ccf9e7495985c22f9d473 *vignettes/plots/fig-qc-quicklook-1.png
325862a5414a703da7b3221e8ff339fb *vignettes/plots/fraq_flow_graph_mermaid.mmd
56c117d6aa3a25fa86970c54b06bb50c *vignettes/plots/fraq_flow_graph_mermaid.png
