0df69456166a4959f8386c65ee3735f4 *DESCRIPTION
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
b6a9ef14e6ccba640b4d6fe32df3701d *NAMESPACE
e26af7652a7e07af87cd492f7518b960 *NEWS
8c8a05a5657478cdca170c692296ade7 *R/combineMatchingTranscripts.R
9bce0486336e6d8c91795c665a678f96 *R/eventDetection.R
3f5a4f99c0b784388e8a777ae089aacb *R/filterInssite.R
37803f3cf0e061d853947cc8eb2334cd *R/filterRT.R
d9ad58f51394f3c81548e7e39db72763 *R/scoreByTranscripts.R
758d46ebc5ee1e9413f2a483c16664c6 *R/svaRetro.R
3820a497c22e572ff52d30602be996e3 *R/txs2genesym.R
50a9d591a955412a948dd0e526f8aedc *R/util.R
22b30e96738eb8f06b499653289bc49e *README-unnamed-chunk-8-1.png
86521d5e4e9affaac9d6d19c6bdb2786 *README.Rmd
7a7f6fa70c1cfce49c8cb67ebebd610c *README.md
2129d5d97b2928e9548e7fb8c593315d *build/vignette.rds
632cfa9649ed2fbd00b33fb5c9d0f549 *flake.lock
526ccd4debda7d23f07d369b0a32e7ce *flake.nix
00cfc37fff80341caba7089a0f3c663a *inst/doc/svaRetro.R
0a71a37107c8e8546f8a353dfb4b3158 *inst/doc/svaRetro.Rmd
22b3b77ca91ed33f6b1a09fe71c353e5 *inst/doc/svaRetro.html
46ba2a3ec52abe34e5616d4256954788 *inst/extdata/diploidSV.vcf
c97c7a88c529f818e2a5aa392ff3d6ab *inst/extdata/gene_symbol.txt
1064be611437a90dea589d9e119fbb38 *inst/script/data_description.txt
534af225b372b2509b30b4a1ae3d7a8b *man/dot-combineMatchingTranscripts.Rd
efcd6414c2131fce8c0b3c2b04bc469d *man/dot-scoreByTranscripts.Rd
a4f477df4acc7a6d92416581d94b043e *man/dot-txs2genesym.Rd
7d3276ae679e082ae95966f0f7ee72fc *man/grapes-na-grapes.Rd
0ed5d13a2f11bce84c68c506e5aa362d *man/grapes-null-grapes.Rd
0c70a1453b9f908bb9a8f80c1a783a0c *man/rtDetect.Rd
01fa2b9f28dc101c3ec2b8e42e2b6f13 *man/svaRetro.Rd
90d60960fe87611318ab3acfef5c19bc *tests/testthat.R
acf74c1b6eccb4563f6382c5d5d02157 *tests/testthat/test-eventDetection.R
0a71a37107c8e8546f8a353dfb4b3158 *vignettes/svaRetro.Rmd
