Package: StatescopeR
Type: Package
Title: StatescopeR framework for discovery of cell states from cell
        type-specific gene expression profiles inferred from bulk mRNA
        profiles
Version: 0.99.31
Authors@R: 
    c(person(given = "Mischa",
             family = "Stetketee",
             role = c("aut", "cre"),
             email = "m.f.b.steketee@amsterdamumc.nl",
             comment = c(ORCID = "0000-0001-7138-7554")),
             person(given = 'KWF',
                    role = 'fnd'))
Depends: R (>= 4.4.0)
Imports: S4Vectors, SummarizedExperiment, reticulate, methods,
        SingleCellExperiment, matrixStats, scran, basilisk, Matrix,
        ComplexHeatmap, ggplot2, cowplot
Suggests: BiocStyle, knitr, RefManageR, rmarkdown, sessioninfo,
        scRNAseq, scuttle, testthat
Description: StatescopeR is an R wrapper around Statescope, a
        computational framework designed to discover cell states from
        cell type-specific gene expression profiles inferred from bulk
        RNA profiles.
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.3.3
StagedInstall: no
biocViews: GeneExpression, RNASeq, SingleCell, Bayesian,
        Transcriptomics, Software
URL: https://github.com/tgac-vumc/StatescopeR
BugReports: https://github.com/tgac-vumc/StatescopeR/issues
VignetteBuilder: knitr
Config/testthat/edition: 3
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-12-03 14:23:55 UTC
RemoteUrl: https://github.com/bioc/StatescopeR
RemoteRef: HEAD
RemoteSha: 9e8c71915846f853b312ac38f5836928acd27e0d
NeedsCompilation: no
Packaged: 2025-12-04 06:26:57 UTC; root
Author: Mischa Stetketee [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7138-7554>),
  KWF [fnd]
Maintainer: Mischa Stetketee <m.f.b.steketee@amsterdamumc.nl>
Built: R 4.6.0; ; 2025-12-04 06:33:28 UTC; windows
