\HeaderA{YEASTENZYME2PROBE}{Mappings between Enzyme Commission numbers and probe identifiers}{YEASTENZYME2PROBE}
\keyword{datasets}{YEASTENZYME2PROBE}
\begin{Description}\relax
YEASTENZYME2PROBE maps Enzyme Commission numbers to probe identifiers
representing genes whose products exhibit the functions of the enzymes
labeled by the Commission Numbers
\end{Description}
\begin{Details}\relax
Enzyme Commission numbers are assigned by the Nomenclature Committee
of the International Union of Biochemistry and Molecular Biology
\url{http://www.chem.qmw.ac.uk/iubmb/enzyme/} to allow enzymes to be
identified. 

An Enzyme Commission number is of the format EC x.y.z.w, where x, y, z,
and w are numeric numbers. In YEASTENZYME2PROBE, EC is dropped from the
Enzyme Commission numbers.

Enzyme Commission numbers have corresponding names that describe the
functions of enzymes in such a way that EC x is a more general
description than EC x.y that in turn is a more general description than
EC x.y.z. The top level EC numbers and names are listed below:

EC 1 oxidoreductases

EC 2 transferases

EC 3 hydrolases

EC 4 lyases

EC 5 isomerases

EC 6 ligases

The EC name for a given EC number can be viewed at
\url{http://www.chem.qmul.ac.uk/iupac/jcbn/index.html#6} 

Mappings were based on data provided by:

KEGG:\url{ftp://ftp.genome.ad.jp/pub/kegg/pathways}. Built: Yeast Genome data are built at various time  intervals. Sources used were downloaded  Fri Jan  7 14:56:44 2005 


Package built Fri Jan  7 16:12:38 2005
\end{Details}
\begin{References}\relax
\url{ftp://ftp.genome.ad.jp/pub/kegg/pathways}
\end{References}
\begin{Examples}
\begin{ExampleCode}
    # Convert to a list
    xx <- as.list(YEASTENZYME2PROBE)
   if(length(xx) > 0){
       # Gets the probe ids for the first five enzyme
       #commission numbers
       xx[1:5]
       # Get the first one
       xx[[1]]
    }
\end{ExampleCode}
\end{Examples}

