hsahomologyHGID         package:hsahomology         R Documentation

_A _v_e_c_t_o_r _c_o_n_t_a_i_n_i_n_g _a_l_l _t_h_e _H_o_m_o_l_o_G_e_n_e_I_D_s _f_o_r _H_o_m_o _s_a_p_i_e_n_s

_D_e_s_c_r_i_p_t_i_o_n:

     hsahomologyHGID is a vector containing all the HomoloGeneIDs for
     Homo sapiens. A HomoloGeneID is a unique identifier used by NCBI
     to represent a sequence in a given organism

_D_e_t_a_i_l_s:

     The HomoloGeneIDs can be used to obtain data for all the
     homologous genes in other organisms that have been identified to
     have homology relationships with the sequences represented by the
     HomoloGeneIDs using the environment hsahomologyDATA.

     hsahomologyDATA is an environment object with key and value pairs.
     Keys are HomoloGeneIDs and values are lists of sub-lists for other
     organisms that have been identified to have homology relationships
     with the genes represented by the HomoloGeneIDs.

     Mappings contained in homology9606 were based on data provided by
     HomoloGene.

     HomoloGene:<URL: 
     ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp>. Built:
     HomoloGene built date not available

     Packagebuilt Fri Jan  7 09:30:30 2005

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene>

_E_x_a_m_p_l_e_s:

         require("annotate") || stop("annotate unavailable")
         get(hsahomologyHGID[1], hsahomologyDATA)

