Source code for pyspark.mllib.fpm

#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements.  See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License.  You may obtain a copy of the License at
#
#    http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#

import numpy
from numpy import array
from collections import namedtuple

from pyspark import SparkContext, since
from pyspark.rdd import ignore_unicode_prefix
from pyspark.mllib.common import JavaModelWrapper, callMLlibFunc, inherit_doc

__all__ = ['FPGrowth', 'FPGrowthModel', 'PrefixSpan', 'PrefixSpanModel']


@inherit_doc
@ignore_unicode_prefix
class FPGrowthModel(JavaModelWrapper):

    """
    .. note:: Experimental

    A FP-Growth model for mining frequent itemsets
    using the Parallel FP-Growth algorithm.

    >>> data = [["a", "b", "c"], ["a", "b", "d", "e"], ["a", "c", "e"], ["a", "c", "f"]]
    >>> rdd = sc.parallelize(data, 2)
    >>> model = FPGrowth.train(rdd, 0.6, 2)
    >>> sorted(model.freqItemsets().collect())
    [FreqItemset(items=[u'a'], freq=4), FreqItemset(items=[u'c'], freq=3), ...

    .. versionadded:: 1.4.0
    """

    @since("1.4.0")
    def freqItemsets(self):
        """
        Returns the frequent itemsets of this model.
        """
        return self.call("getFreqItemsets").map(lambda x: (FPGrowth.FreqItemset(x[0], x[1])))


class FPGrowth(object):
    """
    .. note:: Experimental

    A Parallel FP-growth algorithm to mine frequent itemsets.

    .. versionadded:: 1.4.0
    """

    @classmethod
    @since("1.4.0")
    def train(cls, data, minSupport=0.3, numPartitions=-1):
        """
        Computes an FP-Growth model that contains frequent itemsets.

        :param data: The input data set, each element contains a
            transaction.
        :param minSupport: The minimal support level (default: `0.3`).
        :param numPartitions: The number of partitions used by
            parallel FP-growth (default: same as input data).
        """
        model = callMLlibFunc("trainFPGrowthModel", data, float(minSupport), int(numPartitions))
        return FPGrowthModel(model)

    class FreqItemset(namedtuple("FreqItemset", ["items", "freq"])):
        """
        Represents an (items, freq) tuple.

        .. versionadded:: 1.4.0
        """


@inherit_doc
@ignore_unicode_prefix
class PrefixSpanModel(JavaModelWrapper):
    """
    .. note:: Experimental

    Model fitted by PrefixSpan

    >>> data = [
    ...    [["a", "b"], ["c"]],
    ...    [["a"], ["c", "b"], ["a", "b"]],
    ...    [["a", "b"], ["e"]],
    ...    [["f"]]]
    >>> rdd = sc.parallelize(data, 2)
    >>> model = PrefixSpan.train(rdd)
    >>> sorted(model.freqSequences().collect())
    [FreqSequence(sequence=[[u'a']], freq=3), FreqSequence(sequence=[[u'a'], [u'a']], freq=1), ...

    .. versionadded:: 1.6.0
    """

    @since("1.6.0")
    def freqSequences(self):
        """Gets frequence sequences"""
        return self.call("getFreqSequences").map(lambda x: PrefixSpan.FreqSequence(x[0], x[1]))


class PrefixSpan(object):
    """
    .. note:: Experimental

    A parallel PrefixSpan algorithm to mine frequent sequential patterns.
    The PrefixSpan algorithm is described in J. Pei, et al., PrefixSpan:
    Mining Sequential Patterns Efficiently by Prefix-Projected Pattern Growth
    ([[http://doi.org/10.1109/ICDE.2001.914830]]).

    .. versionadded:: 1.6.0
    """

    @classmethod
    @since("1.6.0")
    def train(cls, data, minSupport=0.1, maxPatternLength=10, maxLocalProjDBSize=32000000):
        """
        Finds the complete set of frequent sequential patterns in the input sequences of itemsets.

        :param data: The input data set, each element contains a sequnce of itemsets.
        :param minSupport: the minimal support level of the sequential pattern, any pattern appears
            more than  (minSupport * size-of-the-dataset) times will be output (default: `0.1`)
        :param maxPatternLength: the maximal length of the sequential pattern, any pattern appears
            less than maxPatternLength will be output. (default: `10`)
        :param maxLocalProjDBSize: The maximum number of items (including delimiters used in
            the internal storage format) allowed in a projected database before local
            processing. If a projected database exceeds this size, another
            iteration of distributed prefix growth is run. (default: `32000000`)
        """
        model = callMLlibFunc("trainPrefixSpanModel",
                              data, minSupport, maxPatternLength, maxLocalProjDBSize)
        return PrefixSpanModel(model)

    class FreqSequence(namedtuple("FreqSequence", ["sequence", "freq"])):
        """
        Represents a (sequence, freq) tuple.

        .. versionadded:: 1.6.0
        """


def _test():
    import doctest
    import pyspark.mllib.fpm
    globs = pyspark.mllib.fpm.__dict__.copy()
    globs['sc'] = SparkContext('local[4]', 'PythonTest')
    (failure_count, test_count) = doctest.testmod(globs=globs, optionflags=doctest.ELLIPSIS)
    globs['sc'].stop()
    if failure_count:
        exit(-1)


if __name__ == "__main__":
    _test()