STexampleData
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see STexampleData.
Collection of spatially resolved transcriptomics datasets in SpatialExperiment Bioconductor format
Bioconductor version: 3.14
Collection of spatially resolved transcriptomics datasets in SpatialExperiment Bioconductor format, for use in examples, demonstrations, tutorials, and other purposes. The datasets have been sourced from various publicly available sources, and cover several technological platforms.
Author: Lukas M. Weber [aut, cre] 
Maintainer: Lukas M. Weber <lukas.weber.edu at gmail.com>
citation("STexampleData")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("STexampleData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("STexampleData")| STexampleData package overview | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, Mus_musculus_Data, ReproducibleResearch, SingleCellData |
| Version | 1.2.0 |
| License | MIT + file LICENSE |
| Depends | ExperimentHub, SpatialExperiment |
| Imports | utils |
| System Requirements | |
| URL | https://github.com/lmweber/STexampleData |
| Bug Reports | https://github.com/lmweber/STexampleData/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | ggspavis |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | STexampleData_1.2.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/STexampleData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/STexampleData |
| Package Short Url | https://bioconductor.org/packages/STexampleData/ |
| Package Downloads Report | Download Stats |