Package: Category

Version: 2.2.1

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build Category

RetCode: 0

Time: 54.6 seconds

Status: OK

PackageFile: Category_2.2.1.tar.gz

* checking for file 'Category/DESCRIPTION' ... OK
* preparing 'Category':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'Category' ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: graph
Loading required package: KEGG
Loading required package: GO
Loading required package: annotate
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
Loading required package: Matrix
Loading required package: lattice
Creating a new generic function for "summary" in "Category"
** help
 >>> Building/Updating help pages for package 'Category'
     Formats: text html latex example 
  ChrMapHyperGParams-class          text    html    latex   example
  ChrMapHyperGResult-class          text    html    latex   example
  GOHyperGParams-class              text    html    latex
  HyperGParams-class                text    html    latex
  HyperGResult-accessors            text    html    latex
  HyperGResult-class                text    html    latex
  HyperGResultBase-class            text    html    latex
  KEGGHyperGParams-class            text    html    latex
  MAPAmat                           text    html    latex   example
  applyByCategory                   text    html    latex   example
  cateGOryMatrix                    text    html    latex   example
  categoryToEntrezBuilder           text    html    latex
  chrBandInciMat                    text    html    latex   example
  findAMstats                       text    html    latex   example
  geneGoHyperGeoTest                text    html    latex
  geneKeggHyperGeoTest              text    html    latex
  getPathNames                      text    html    latex   example
  hyperGTest                        text    html    latex
  makeChrBandGraph                  text    html    latex   example
  makeEBcontr                       text    html    latex   example
  makeValidParams                   text    html    latex
  probes2MAP                        text    html    latex   example
  probes2Path                       text    html    latex   example
  ttperm                            text    html    latex   example
  universeBuilder                   text    html    latex
** building package indices ...
* DONE (Category)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'Category_2.2.1.tar.gz'