Package: SNPchip

Version: 1.0.0

Command: E:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD build SNPchip

RetCode: 0

Time: 46.1 seconds

Status: OK

PackageFile: SNPchip_1.0.0.tar.gz

* checking for file 'SNPchip/DESCRIPTION' ... OK
* preparing 'SNPchip':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.0-bioc/tmpdir/Rinst214066021


---------- Making package SNPchip ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: geneplotter
Loading required package: annotate
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: oligo
Loading required package: affyio
Loading required package: splines
Loading required package: RSQLite
Loading required package: DBI
Loading required package: BufferedMatrix
Loading required package: BufferedMatrixMethods
This is the oligo package
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'SNPchip'
     Formats: text html latex example chm 
  AnnotatedSnpCallSet-class         text    html    latex   example chm
  AnnotatedSnpCopyNumberSet-class   text    html    latex   example chm
  AnnotatedSnpSet-class             text    html    latex   example chm
  addFeatureData-method             text    html    latex           chm
  alleleA                           text    html    latex   example chm
  alleleB                           text    html    latex   example chm
  annSnpset                         text    html    latex   example chm
  centromere                        text    html    latex   example chm
  chromosome                        text    html    latex           chm
  chromosomeAnnotation              text    html    latex   example chm
  chromosomeSize                    text    html    latex   example chm
  coerce-methods                    text    html    latex           chm
  copyNumber                        text    html    latex           chm
  cytoband                          text    html    latex   example chm
  dbSnpId                           text    html    latex   example chm
  enzyme                            text    html    latex   example chm
  fData                             text    html    latex   example chm
  fragmentLength                    text    html    latex   example chm
  getSnpAnnotation                  text    html    latex   example chm
  hapmap                            text    html    latex   example chm
  initialize-methods                text    html    latex           chm
  plotCytoband                      text    html    latex   example chm
  plotSnp                           text    html    latex   example chm
  position                          text    html    latex           chm
  show-methods                      text    html    latex           chm
  showSummary                       text    html    latex   example chm
  smoothSnp                         text    html    latex   example chm
  summary-methods                   text    html    latex           chm
  unsplitS4                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.0-bioc\meat\SNPchip\chm\SNPchip.chm





Compile time: 0 minutes, 2 seconds

30	Topics

138	Local links

1	Internet link

1	Graphic





Created e:\biocbld\bbs-2.0-bioc\meat\SNPchip\chm\SNPchip.chm, 41,242 bytes

Compression decreased file by 63,990 bytes.

  adding MD5 sums

* DONE (SNPchip)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'SNPchip_1.0.0.tar.gz'