Package: globaltest

Version: 4.6.0

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check globaltest_4.6.0.tar.gz

RetCode: 0

Time: 390.3 seconds

Status: OK

CheckDir: globaltest.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.0-bioc/meat/globaltest.Rcheck'
* using R version 2.5.0 (2007-04-23)
* checking for file 'globaltest/DESCRIPTION' ... OK
* this is package 'globaltest' version '4.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'globaltest' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating globaltest-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating globaltest-manual.tex ... OK
* checking globaltest-manual.tex ... OK

installing R.css in D:/biocbld/bbs-2.0-bioc/meat/globaltest.Rcheck


---------- Making package globaltest ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: survival
Loading required package: splines
Creating a new generic function for "fitted.values" in "globaltest"
Creating a new generic function for "residuals" in "globaltest"
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'globaltest'
     Formats: text html latex example chm 
  GOstructure                       text    html    latex           chm
  annotation.vandeVijver            text    html    latex           chm
  checkerboard                      text    html    latex   example chm
  geneplot                          text    html    latex   example chm
  globaltest                        text    html    latex   example chm
  gostructure.vandeVijver           text    html    latex           chm
  gt.barplot-class                  text    html    latex           chm
  gt.result-class                   text    html    latex           chm
  gtGO                              text    html    latex   example chm
  mlogit                            text    html    latex   example chm
  multtest                          text    html    latex   example chm
  permutations                      text    html    latex   example chm
  regressionplot                    text    html    latex   example chm
  sampleplot                        text    html    latex   example chm
  sampling                          text    html    latex   example chm
  vandeVijver                       text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.0-bioc\meat\globaltest.Rcheck\00_pkg_src\globaltest\chm\globaltest.chm


Compile time: 0 minutes, 0 seconds
17	Topics
162	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.0-bioc\meat\globaltest.Rcheck\00_pkg_src\globaltest\chm\globaltest.chm, 48,289 bytes
Compression decreased file by 45,531 bytes.
  preparing package globaltest for lazy loading
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: survival
Loading required package: splines
  adding MD5 sums

* DONE (globaltest)