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marray

1.14.0

Yee Hwa (Jean) Yang
Last Changed Date: 2007-04-24 11:21:48 -0700
Last Changed Rev: 24214
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 (32-bit) x64  OK [ OK ] OK 
liverpool Windows Server 2003 R2 (32-bit) x64  OK  OK  OK 
derby Mac OS X (10.4.9) i686  OK  OK 
Package: marray
Version: 1.14.0
Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check marray_1.14.0.tar.gz
RetCode: 0
Time: 290.8 seconds
Status: OK
CheckDir: marray.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.0-bioc/meat/marray.Rcheck'
* using R version 2.5.0 (2007-04-23)
* checking for file 'marray/DESCRIPTION' ... OK
* this is package 'marray' version '1.14.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'marray' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating marray-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating marray-manual.tex ... OK
* checking marray-manual.tex ... OK

marray.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-2.0-bioc/meat/marray.Rcheck


---------- Making package marray ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: limma
Loading required package: tkWidgets
Loading required package: widgetTools
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DynDoc
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'marray'
     Formats: text html latex example chm 
  boxplot                           text    html    latex   example chm
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  maSelectGnames                    text    html    latex   example chm
  maText                            text    html    latex   example chm
  maTop                             text    html    latex   example chm
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  mapGeneInfo                       text    html    latex   example chm
  marray-internal                   text    html    latex           chm
  marrayInfo-class                  text    html    latex   example chm
  marrayLayout-class                text    html    latex   example chm
  marrayNorm-class                  text    html    latex   example chm
  marrayRaw-class                   text    html    latex   example chm
  opVersionID                       text    html    latex   example chm
  plotMA                            text    html    latex   example chm
  print-methods                     text    html    latex           chm
  read.Galfile                      text    html    latex   example chm
  read.marrayInfo                   text    html    latex   example chm
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  read.marrayRaw                    text    html    latex   example chm
  rm.na                             text    html    latex   example chm
  showLargeObject                   text    html    latex   example chm
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  stat.gnames                       text    html    latex   example chm
  swirl                             text    html    latex           chm
  write.list                        text    html    latex   example chm
  write.marray                      text    html    latex   example chm
  write.xls                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.0-bioc\meat\marray.Rcheck\00_pkg_src\marray\chm\marray.chm


Compile time: 0 minutes, 0 seconds
69	Topics
700	Local links
37	Internet links
1	Graphic


Created d:\biocbld\bbs-2.0-bioc\meat\marray.Rcheck\00_pkg_src\marray\chm\marray.chm, 110,149 bytes
Compression decreased file by 274,101 bytes.
  adding MD5 sums

* DONE (marray)