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Package 136/214 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
oligo1.0.2Benilton CarvalhoLast Changed Date: 2007-04-25 11:40:29 -0700 Last Changed Rev: 24277 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
wellington | Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
churchill | Solaris 2.9 | sparc | OK | WARNINGS | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | WARNINGS | [ OK ] | |
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | WARNINGS | OK | |
derby | Mac OS X (10.4.9) | i686 | OK | WARNINGS |
Package: oligo |
Version: 1.0.2 |
Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD INSTALL --build --library=oligo.BUILDBINinstdir oligo_1.0.2.tar.gz |
RetCode: 0 |
Time: 20.0 seconds |
Status: OK |
PackageFile: oligo_1.0.2.zip |
installing R.css in D:/biocbld/bbs-2.0-bioc/meat/oligo.BUILDBINinstdir Using auto-selected zip options ' oligo-HELP=ziponly' ---------- Making package oligo ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making M_estimator2.d from M_estimator2.c making baseProfile.d from baseProfile.c making basecontent.d from basecontent.c gcc -ID:/biocbld/bbs-2.0-bioc/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c M_estimator2.c -o M_estimator2.o M_estimator2.c: In function `R_HuberMatrixRows2': M_estimator2.c:129: warning: 'scale1' might be used uninitialized in this function M_estimator2.c:129: warning: 'scale2' might be used uninitialized in this function M_estimator2.c:129: warning: 'scale3' might be used uninitialized in this function gcc -ID:/biocbld/bbs-2.0-bioc/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c baseProfile.c -o baseProfile.o gcc -ID:/biocbld/bbs-2.0-bioc/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c basecontent.c -o basecontent.o windres -I D:/biocbld/bbs-2.0-bioc/R/include -i oligo_res.rc -o oligo_res.o gcc -shared -s -o oligo.dll oligo.def M_estimator2.o baseProfile.o basecontent.o oligo_res.o -LD:/biocbld/bbs-2.0-bioc/R/bin -lR ... DLL made installing DLL installing R files save image Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: affyio Loading required package: splines Loading required package: RSQLite Loading required package: DBI Loading required package: BufferedMatrix Loading required package: BufferedMatrixMethods installing inst files installing man source files installing indices installing help >>> Building/Updating help pages for package 'oligo' Formats: text html latex example chm DBPDInfo-class text html latex example chm FeatureSet-class text html latex example chm missing link(s): eSet-class VersionedBiobase-class Versioned-class eSet-class VersionedBiobase-class Versioned-class FeatureSetExtensions-class text html latex example chm missing link(s): eSet-class VersionedBiobase-class Versioned-class eSet-class VersionedBiobase-class Versioned-class Index-methods text html latex example chm IntensityMatrix-methods text html latex example chm PDInfo-class text html latex example chm PDInfo-methods text html latex example chm Sequences-methods text html latex example chm SnpCallSet-methods text html latex example chm SnpCopyNumberSet-methods text html latex example chm SnpQSet-class text html latex example chm missing link(s): eSet-class VersionedBiobase-class Versioned-class eSet-class VersionedBiobase-class Versioned-class SnpQSet-methods text html latex example chm SnpSetExtensions-class text html latex example chm missing link(s): eSet-class VersionedBiobase-class Versioned-class eSet-class VersionedBiobase-class Versioned-class basecontent text html latex example chm boxplot text html latex example chm chromosome text html latex example chm crlmm text html latex example chm featureIndex text html latex example chm genomeBuild text html latex example chm getPlatformDesign text html latex example chm hist text html latex example chm image text html latex example chm internals text html latex example chm kind text html latex example chm list.celfiles text html latex example chm manufacturer text html latex example chm nProbes text html latex example chm ncol text html latex example chm oligo-package text html latex example chm platform text html latex example chm platformDesign-class text html latex example chm plotDensity text html latex example chm pmAllele text html latex example chm pmPosition text html latex example chm pmStrand text html latex example chm probeNames text html latex example chm read.celfiles text html latex example chm read.xysfiles text html latex example chm rma text html latex example chm sequenceDesignMatrix text html latex example chm snprma text html latex example chm snprmaSummaries text html latex example chm zipping help files Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.0-bioc\meat\R.INSTALL.9528\oligo\chm\oligo.chm Compile time: 0 minutes, 0 seconds 43 Topics 215 Local links 0 Internet links 1 Graphic Created d:\biocbld\bbs-2.0-bioc\meat\R.INSTALL.9528\oligo\chm\oligo.chm, 41,504 bytes Compression decreased file by 89,520 bytes. adding MD5 sums packaged installation of package 'oligo' as oligo_1.0.2.zip * DONE (oligo)