Package: reb

Version: 1.10.0

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD build reb

RetCode: 0

Time: 30.5 seconds

Status: OK

PackageFile: reb_1.10.0.tar.gz

* checking for file 'reb/DESCRIPTION' ... OK
* preparing 'reb':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.0-bioc/tmpdir/Rinst532018814


---------- Making package reb ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making movbin.d from movbin.c
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c movbin.c -o movbin.o
movbin.c: In function `bcount':
movbin.c:37: warning: suggest parentheses around comparison in operand of &
movbin.c: In function `bscore':
movbin.c:48: warning: implicit declaration of function `sqrt'
movbin.c: In function `mean':
movbin.c:63: warning: suggest parentheses around comparison in operand of &
movbin.c: In function `mspan_mov_binom_mx':
movbin.c:128: warning: unused variable `im_mx'
movbin.c: In function `mspan_mov_binom':
movbin.c:145: warning: unused variable `r'
movbin.c:145: warning: unused variable `c'
movbin.c: In function `main':
movbin.c:158: warning: unused variable `data'
movbin.c:160: warning: unused variable `gx2'
movbin.c:161: warning: unused variable `im_vec'
movbin.c:161: warning: unused variable `im_mx'
movbin.c:162: warning: unused variable `sum_vec'
movbin.c:162: warning: unused variable `sum_mx'
movbin.c:163: warning: unused variable `range'
movbin.c:166: warning: unused variable `rlen'
movbin.c:168: warning: unused variable `nr'
windres -I d:/biocbld/bbs-2.0-bioc/R/include  -i reb_res.rc -o reb_res.o
gcc  -shared -s  -o reb.dll reb.def movbin.o reb_res.o  -Ld:/biocbld/bbs-2.0-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'reb'
     Formats: text html latex example chm 
  Hs.arms                           text    html    latex           chm
  absMax                            text    html    latex   example chm
  buildChromCytoband                text    html    latex   example chm
  buildChromMap                     text    html    latex   example chm
  cset2band                         text    html    latex   example chm
  fromRevIsh                        text    html    latex   example chm
  isAbnormal                        text    html    latex   example chm
  mcr.eset                          text    html    latex   example chm
  movbin                            text    html    latex   example chm
  movt                              text    html    latex   example chm
  naMean                            text    html    latex   example chm
  regmap                            text    html    latex   example chm
  revish                            text    html    latex   example chm
  rmAmbigMappings                   text    html    latex   example chm
  smoothByRegion                    text    html    latex   example chm
  summarizeByRegion                 text    html    latex   example chm
  t.binom.test                      text    html    latex   example chm
  writeGFF3                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.0-bioc\meat\reb\chm\reb.chm





Compile time: 0 minutes, 0 seconds

19	Topics

51	Local links

0	Internet links

1	Graphic





Created d:\biocbld\bbs-2.0-bioc\meat\reb\chm\reb.chm, 39,380 bytes

Compression decreased file by 22,717 bytes.

  adding MD5 sums

* DONE (reb)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'reb_1.10.0.tar.gz'