Package: GraphAT

Version: 1.8.0

Command: /loc/biocbuild/bbs-2.0-bioc/R/bin/R CMD check GraphAT_1.8.0.tar.gz

RetCode: 0

Time: 192.7 seconds

Status: OK

CheckDir: GraphAT.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.0-bioc/meat/GraphAT.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'GraphAT/DESCRIPTION' ... OK
* this is package 'GraphAT' version '1.8.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GraphAT' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating GraphAT-Ex.R ... OK
* checking examples ... OK
* creating GraphAT-manual.tex ... OK
* checking GraphAT-manual.tex ... OK

* Installing *source* package 'GraphAT' ...
** R
** data
** help
 >>> Building/Updating help pages for package 'GraphAT'
     Formats: text html latex example 
  Phenoclusters                     text    html    latex   example
  causton                           text    html    latex   example
  cellcycle                         text    html    latex   example
  clust2Mat                         text    html    latex   example
  depthmat                          text    html    latex   example
  getpvalue                         text    html    latex   example
  giaever                           text    html    latex   example
  mRNAclusters                      text    html    latex   example
  makeClustM                        text    html    latex   example
  mat2UndirG                        text    html    latex   example
  permPower                         text    html    latex   example
  perms                             text    html    latex   example
** building package indices ...
* DONE (GraphAT)