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Package 71/214 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
genefilter1.14.1Biocore TeamLast Changed Date: 2007-04-24 14:06:35 -0700 Last Changed Rev: 24226 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | [ OK ] | OK | OK |
Package: genefilter |
Version: 1.14.1 |
Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD build genefilter |
RetCode: 0 |
Time: 41.5 seconds |
Status: OK |
PackageFile: genefilter_1.14.1.tar.gz |
* checking for file 'genefilter/DESCRIPTION' ... OK * preparing 'genefilter': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to re-build vignettes installing R.css in D:/biocbld/bbs-2.0-bioc/tmpdir/Rinst581656942 ---------- Making package genefilter ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making init.d from init.c making nd.d from nd.c making pAUC.d from pAUC.c making rowPAUCs.d from rowPAUCs.c making rowttests.d from rowttests.c making half_range_mode.d from half_range_mode.cpp gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c init.c -o init.o gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c nd.c -o nd.o nd.c: In function `gf_dist_binary': nd.c:219: warning: unused variable `w1' nd.c:219: warning: unused variable `w2' gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c pAUC.c -o pAUC.o pAUC.c: In function `pAUC_c': pAUC.c:75: warning: operation on `ta' may be undefined pAUC.c:78: warning: operation on `ta' may be undefined pAUC.c:81: warning: operation on `ta' may be undefined pAUC.c: In function `pAUC': pAUC.c:141: warning: suggest parentheses around comparison in operand of | pAUC.c:123: warning: unused variable `i' pAUC.c: In function `pAUC_c': pAUC.c:22: warning: 'xsum' might be used uninitialized in this function pAUC.c:22: warning: 'ysum' might be used uninitialized in this function gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c rowPAUCs.c -o rowPAUCs.o rowPAUCs.c: In function `ROCpAUC_c': rowPAUCs.c:95: warning: operation on `ta' may be undefined rowPAUCs.c:98: warning: operation on `ta' may be undefined rowPAUCs.c:101: warning: operation on `ta' may be undefined rowPAUCs.c:23: warning: 'xsum' might be used uninitialized in this function rowPAUCs.c:23: warning: 'ysum' might be used uninitialized in this function gcc -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O3 -std=gnu99 -c rowttests.c -o rowttests.o g77 -O3 -Wall -c ttest.f -o ttest.o g++ -Id:/biocbld/bbs-2.0-bioc/R/include -Wall -O2 -c half_range_mode.cpp -o half_range_mode.o windres -I d:/biocbld/bbs-2.0-bioc/R/include -i genefilter_res.rc -o genefilter_res.o g++ -shared -s -o genefilter.dll genefilter.def init.o nd.o pAUC.o rowPAUCs.o rowttests.o ttest.o half_range_mode.o genefilter_res.o -Ld:/biocbld/bbs-2.0-bioc/R/bin -lg2c -lR ... DLL made installing DLL installing R files save image Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: survival Loading required package: splines Creating a new generic function for "plot" in "genefilter" installing inst files installing data files preparing package genefilter for lazy data loading installing man source files installing indices installing help >>> Building/Updating help pages for package 'genefilter' Formats: text html latex example chm Anova text html latex example chm allNA text html latex example chm coxfilter text html latex example chm cv text html latex example chm eSetFilter text html latex example chm filterfun text html latex example chm findLargest text html latex example chm gapFilter text html latex example chm genefilter text html latex example chm genefinder text html latex example chm genescale text html latex example chm half.range.mode text html latex example chm kOverA text html latex example chm maxA text html latex example chm nsFilter text html latex example chm pOverA text html latex example chm rowFtests text html latex example chm rowROC-class text html latex example chm rowSds text html latex example chm rowpAUCs text html latex example chm shorth text html latex example chm tdata text html latex example chm ttest text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.0-bioc\meat\genefilter\chm\genefilter.chm Compile time: 0 minutes, 0 seconds 24 Topics 121 Local links 2 Internet links 1 Graphic Created d:\biocbld\bbs-2.0-bioc\meat\genefilter\chm\genefilter.chm, 54,181 bytes Compression decreased file by 49,298 bytes. adding MD5 sums * DONE (genefilter) * creating vignettes ... OK * cleaning src * removing junk files * checking for LF line-endings in source files * checking for empty or unneeded directories * building 'genefilter_1.14.1.tar.gz'