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Package 198/214 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
splicegear1.8.0LaurentLast Changed Date: 2007-04-24 11:21:48 -0700 Last Changed Rev: 24214 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | [ OK ] |
Package: splicegear |
Version: 1.8.0 |
Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD INSTALL --build --library=splicegear.buildbin-libdir splicegear_1.8.0.tar.gz |
RetCode: 0 |
Time: 17.2 seconds |
Status: OK |
PackageFile: splicegear_1.8.0.zip |
installing R.css in D:/biocbld/bbs-2.0-bioc/meat/splicegear.buildbin-libdir Using auto-selected zip options 'splicegear-ZIPDATA=zip' ---------- Making package splicegear ------------ adding build stamp to DESCRIPTION installing R files save image Loading required package: grid Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: XML Loading required package: annotate [1] TRUE [1] "SpliceSites" Warning messages: 1: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead 2: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead 3: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead [1] "show" [1] "plot" [1] "plot" [1] "initialize" [1] "grid.plot" [1] "grid.plot" [1] "Probes" [1] "initialize" [1] "show" [1] "plot" [1] "plot" [1] "grid.plot" [1] "grid.plot" [1] "SpliceSitesGenomic" [1] "plot" [1] TRUE [1] "SpliceExprSet" Warning message: The exprSet class is deprecated, use ExpressionSet instead [1] "spliceSites" [1] "spliceSites" [1] "exprs" [1] "exprs<-" [1] "show" [1] "plot" [1] "grid.plot" installing inst files installing data files installing man source files installing indices zipping data installing help >>> Building/Updating help pages for package 'splicegear' Formats: text html latex example chm Probes-class text html latex example chm SpliceExprSet-class text html latex example chm SpliceSites-class text html latex example chm SpliceSitesGenomic-class text html latex example chm as.data.frame.SpliceExprSet text html latex example chm barplot.SpliceSites text html latex example chm buildSpliceSites text html latex example chm getRelSignStrength text html latex example chm grid.helpers text html latex chm grid.plot.SpliceSites text html latex example chm isProbeOnSpliceSite text html latex example chm matchprobes2Probes text html latex chm plot.SpliceExprSet text html latex example chm plot.SpliceSites text html latex example chm plot.SpliceSitesGenomic text html latex example chm sort.SpliceExprSet text html latex example chm spliceset text html latex example chm split.SpliceSites text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.0-bioc\meat\R.INSTALL.2828\splicegear\chm\splicegear.chm Compile time: 0 minutes, 0 seconds 19 Topics 105 Local links 0 Internet links 1 Graphic Created d:\biocbld\bbs-2.0-bioc\meat\R.INSTALL.2828\splicegear\chm\splicegear.chm, 36,573 bytes Compression decreased file by 38,159 bytes. adding MD5 sums packaged installation of package 'splicegear' as splicegear_1.8.0.zip * DONE (splicegear)