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Package 58/553HostnameOS / ArchBUILDCHECKBUILD BIN
bgx 1.20.0
Ernest Turro
Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/bgx
Last Changed Rev: 64678 / Revision: 69725
Last Changed Date: 2012-03-30 15:05:02 -0700 (Fri, 30 Mar 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: bgx
Version: 1.20.0
Command: rm -rf bgx.buildbin-libdir && mkdir bgx.buildbin-libdir && E:\biocbld\bbs-2.10-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=bgx.buildbin-libdir bgx_1.20.0.tar.gz
StartedAt: 2012-09-24 02:59:40 -0700 (Mon, 24 Sep 2012)
EndedAt: 2012-09-24 03:01:26 -0700 (Mon, 24 Sep 2012)
EllapsedTime: 106.5 seconds
RetCode: 0
Status:  OK  
PackageFile: bgx_1.20.0.zip
PackageFileSize: 665.8 KiB

Command output


install for i386

* installing *source* package 'bgx' ...
** libs
g++  -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx.cc -o bgx.o
g++  -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx_frontend.cc -o bgx_frontend.o
gcc  -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl      -DUSING_R -ffast-math -O3  -std=c99   -O3 -Wall  -std=gnu99 -mtune=core2 -c qnorm.c -o qnorm.o
g++  -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c rundir.cc -o rundir.o
g++  -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl      -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c sokal.cc -o sokal.o
g++ -shared -s -static-libgcc -o bgx.dll tmp.def bgx.o bgx_frontend.o qnorm.o rundir.o sokal.o -LE:/biocbld/BBS-2˜1.10-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/bgx.buildbin-libdir/bgx/libs/i386
** R
** inst
** preparing package for lazy loading
BiocInstaller version 1.4.7, ?biocLite for help
** help
*** installing help indices
** building package indices
** installing vignettes
   'bgx.Rnw' 
** testing if installed package can be loaded
BiocInstaller version 1.4.7, ?biocLite for help

install for x64

* installing *source* package 'bgx' ...
** libs
g++ -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I ../boostIncl    -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx.cc -o bgx.o
g++ -m64 -I"E:/biocbld/BBS-2~1.10-/R/include" -DNDEBUG -I ../boostIncl    -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c bgx_frontend.cc -o bgx_frontend.o
gcc -m64 -I"E:/biocbld/BBS-2~1.10-/R/include" -DNDEBUG -I ../boostIncl    -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -DUSING_R -ffast-math -O3  -std=c99   -O2 -Wall  -std=gnu99 -mtune=core2 -c qnorm.c -o qnorm.o
g++ -m64 -I"E:/biocbld/BBS-2~1.10-/R/include" -DNDEBUG -I ../boostIncl    -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c rundir.cc -o rundir.o
g++ -m64 -I"E:/biocbld/BBS-2~1.10-/R/include" -DNDEBUG -I ../boostIncl    -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -DUSING_R -ffast-math -O3   -O2 -Wall  -mtune=core2 -c sokal.cc -o sokal.o
g++ -m64 -shared -s -static-libgcc -o bgx.dll tmp.def bgx.o bgx_frontend.o qnorm.o rundir.o sokal.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2~1.10-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/bgx.buildbin-libdir/bgx/libs/x64
** testing if installed package can be loaded
BiocInstaller version 1.4.7, ?biocLite for help
* MD5 sums
packaged installation of 'bgx' as bgx_1.20.0.zip

* DONE (bgx)