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Package 401/553HostnameOS / ArchBUILDCHECKBUILD BIN
phyloseq 1.0.3
Paul J. McMurdie
Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/phyloseq
Last Changed Rev: 69344 / Revision: 69725
Last Changed Date: 2012-09-11 17:07:57 -0700 (Tue, 11 Sep 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: phyloseq
Version: 1.0.3
Command: rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh phyloseq_1.0.3.tar.gz /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R phyloseq.buildbin-libdir
StartedAt: 2012-09-24 02:23:43 -0700 (Mon, 24 Sep 2012)
EndedAt: 2012-09-24 02:23:59 -0700 (Mon, 24 Sep 2012)
EllapsedTime: 16.1 seconds
RetCode: 0
Status:  OK 
PackageFile: phyloseq_1.0.3.tgz
PackageFileSize: 1.962 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=phyloseq.buildbin-libdir phyloseq_1.0.3.tar.gz'
>>>>>>> 

* installing *source* package 'phyloseq' ...
** R
** data
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "pipe" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "textConnection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices
** installing vignettes
   'phyloseq_analysis.Rnw' 
   'phyloseq_basics.Rnw' 
** testing if installed package can be loaded
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "pipe" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "textConnection" in package 'BiocGenerics' seems equivalent to one from package 'RJSONIO' and is not turning on duplicate class definitions for this class

* DONE (phyloseq)