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Package 413/554HostnameOS / ArchBUILDCHECKBUILD BIN
ppiStats 1.22.0
Tony Chiang
Snapshot Date: 2012-03-31 17:01:49 -0700 (Sat, 31 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/ppiStats
Last Changed Rev: 64678 / Revision: 64719
Last Changed Date: 2012-03-30 15:05:02 -0700 (Fri, 30 Mar 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
puck5 Linux (Ubuntu 12.04) / x86_64 [ ERROR ] skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: ppiStats
Version: 1.22.0
Command: /home/hpages/test-puck5/bbs-2.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ppiStats
StartedAt: 2012-03-31 20:34:48 -0700 (Sat, 31 Mar 2012)
EndedAt: 2012-03-31 20:35:18 -0700 (Sat, 31 Mar 2012)
EllapsedTime: 30.7 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'ppiStats/DESCRIPTION' ... OK
* preparing 'ppiStats':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: ScISI
Loading required package: GO.db
Loading required package: AnnotationDbi
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following object(s) are masked from 'package:stats':

    xtabs

The following object(s) are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
    rownames, sapply, setdiff, table, tapply, union, unique

Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: DBI

Loading required package: RpsiXML
Loading required package: annotate
Loading required package: graph
Loading required package: RBGL
Loading required package: XML

Attaching package: 'XML'

The following object(s) are masked from 'package:graph':

    addNode

Loading required package: hypergraph

Attaching package: 'hypergraph'

The following object(s) are masked from 'package:AnnotationDbi':

    head, tail

The following object(s) are masked from 'package:utils':

    head, tail

Loading required package: apComplex

Loading required package: lattice
Loading required package: ppiData

*** Deprecation warning ***:
The package 'ppiData' is deprecated and will not be supported after Bioconductor release 2.11


Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running 'texi2dvi' on 'ppiStats.tex' failed.
LaTeX errors:
! Package auto-pst-pdf Error: 
    "shell escape" (or "write18") is not enabled:
    auto-pst-pdf will not work!
.
Calls: <Anonymous> -> texi2pdf -> texi2dvi
Execution halted