Package: RNAinteractMAPK

Version: 1.0.10

Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch RNAinteractMAPK_1.0.10.tar.gz

StartedAt: 2013-03-24 12:30:00 -0700 (Sun, 24 Mar 2013)

EndedAt: 2013-03-24 12:33:48 -0700 (Sun, 24 Mar 2013)

EllapsedTime: 228.2 seconds

RetCode: 0

Status:  OK

CheckDir: RNAinteractMAPK.Rcheck

Warnings: 0

* using log directory '/Users/biocbuild/bbs-2.11-data-experiment/meat/RNAinteractMAPK.Rcheck'
* using R version 2.15.3 (2013-03-01)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'RNAinteractMAPK/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RNAinteractMAPK' version '1.0.10'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'RNAinteractMAPK' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 11.3Mb
  sub-directories of 1Mb or more:
    data      6.7Mb
    extdata   3.6Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  '/Users/biocbuild/bbs-2.11-data-experiment/meat/RNAinteractMAPK.Rcheck/00check.log'
for details.

* installing *source* package 'RNAinteractMAPK' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'RNAinteractMAPK.Rnw' 
** testing if installed package can be loaded

* DONE (RNAinteractMAPK)

name	user	system	elapsed
Dmel2PPMAPK	3.161	0.124	3.295
ElpB1phenotype	0.006	0.001	0.007
Networks	0.004	0.001	0.005
PhysicalInteractions	0.002	0.001	0.003
RNAinteractMAPK-package	1.672	0.128	1.839
cellTiterGlo	0.006	0.002	0.009
dsRNAiDilutionSeriesData	0.046	0.052	0.098
mRNAdoubleKDefficiency	0.005	0.002	0.007
mRNAsingleKDefficiency	0.004	0.001	0.006
pathwayMembership	0.003	0.001	0.004
singleKDphenotype	0.010	0.002	0.013