Package: hgu133afrmavecs

Version: 1.1.10

Command: /home/biocbuild/bbs-2.11-bioc/R/bin/R CMD check --no-vignettes --timings hgu133afrmavecs_1.1.10.tar.gz

StartedAt: 2012-05-15 14:14:55 -0700 (Tue, 15 May 2012)

EndedAt: 2012-05-15 14:15:43 -0700 (Tue, 15 May 2012)

EllapsedTime: 48.6 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: hgu133afrmavecs.Rcheck

Warnings: 2

* using log directory ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/hgu133afrmavecs.Rcheck’
* using R version 2.15.0 Patched (2012-04-26 r59216)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘hgu133afrmavecs/DESCRIPTION’ ... OK
* this is package ‘hgu133afrmavecs’ version ‘1.1.10’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘hgu133afrmavecs’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 13.1Mb
  sub-directories of 1Mb or more:
    data  13.1Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented data sets:
  ‘vecs’
All user-level objects in a package should have documentation entries.
See the chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                               old_size new_size compress
  hgu133abarcodevecs.rda          487Kb    411Kb       xz
  hgu133afrmavecs.rda             7.5Mb    6.7Mb       xz
  hgu133ahsentrezgfrmavecs.rda    5.1Mb    4.6Mb       xz
* checking examples ... OK
* checking PDF version of manual ... OK

WARNING: There were 2 warnings.
NOTE: There was 1 note.
See
  ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/hgu133afrmavecs.Rcheck/00check.log’
for details.

* installing *source* package ‘hgu133afrmavecs’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (hgu133afrmavecs)

name	user	system	elapsed
hgu133abarcodevecs	0.092	0.004	0.174
hgu133afrmavecs	0.420	0.056	0.796