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Package 103/133HostnameOS / ArchBUILDCHECKBUILD BIN
pd.atdschip.tiling 0.0.4
Kristof De Beuf
Snapshot Date: 2013-03-24 09:15:27 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/pd.atdschip.tiling
Last Changed Rev: 2168 / Revision: 2286
Last Changed Date: 2012-10-01 10:57:19 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: pd.atdschip.tiling
Version: 0.0.4
Command: rm -rf pd.atdschip.tiling.buildbin-libdir && mkdir pd.atdschip.tiling.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=pd.atdschip.tiling.buildbin-libdir pd.atdschip.tiling_0.0.4.tar.gz >pd.atdschip.tiling-install.out 2>&1 && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD check --library=pd.atdschip.tiling.buildbin-libdir --install="check:pd.atdschip.tiling-install.out" --force-multiarch --no-vignettes --timings pd.atdschip.tiling_0.0.4.tar.gz && mv pd.atdschip.tiling.buildbin-libdir/* pd.atdschip.tiling.Rcheck/ && rmdir pd.atdschip.tiling.buildbin-libdir
StartedAt: 2013-03-24 12:40:59 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 12:50:00 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 540.8 seconds
RetCode: 0
Status:  OK  
CheckDir: pd.atdschip.tiling.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.11-data-experiment/meat/pd.atdschip.tiling.Rcheck'
* using R version 2.15.3 (2013-03-01)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'pd.atdschip.tiling/DESCRIPTION' ... OK
* this is package 'pd.atdschip.tiling' version '0.0.4'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'pd.atdschip.tiling' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 256.4Mb
  sub-directories of 1Mb or more:
    data      43.3Mb
    extdata  213.0Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'pd.atdschip.tiling/R/all.R':
  .onLoad calls:
    require(RSQLite, quietly = TRUE)

Package startup functions should not change the search path.
See section 'Good practice' in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
               user system elapsed
probeSequences 7.91    0.2    8.19
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
               user system elapsed
probeSequences 6.67    0.1    6.76
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  'D:/biocbld/bbs-2.11-data-experiment/meat/pd.atdschip.tiling.Rcheck/00check.log'
for details.

pd.atdschip.tiling.Rcheck/00install.out:


install for i386

* installing *source* package 'pd.atdschip.tiling' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'pd.atdschip.tiling' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pd.atdschip.tiling' as pd.atdschip.tiling_0.0.4.zip

* DONE (pd.atdschip.tiling)