Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q [R] S  T  U  V  W  X  Y  Z 

Package 521/610HostnameOS / ArchBUILDCHECKBUILD BIN
rSFFreader 0.7.0
Matt Settles
Snapshot Date: 2012-10-02 17:00:02 -0700 (Tue, 02 Oct 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rSFFreader
Last Changed Rev: 70052 / Revision: 70113
Last Changed Date: 2012-10-01 15:43:56 -0700 (Mon, 01 Oct 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ ERROR ] skipped  skipped 
petty Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: rSFFreader
Version: 0.7.0
Command: chmod a+r rSFFreader -R && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data rSFFreader
StartedAt: 2012-10-02 23:59:31 -0700 (Tue, 02 Oct 2012)
EndedAt: 2012-10-02 23:59:35 -0700 (Tue, 02 Oct 2012)
EllapsedTime: 4.3 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'rSFFreader/DESCRIPTION' ... OK
* preparing 'rSFFreader':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package 'rSFFreader' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2~1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -m32 -I"E:/biocbld/BBS-2~1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c IRanges_stubs.c -o IRanges_stubs.o
gcc -m32 -I"E:/biocbld/BBS-2~1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c R_init_rSFFreader.c -o R_init_rSFFreader.o
gcc -m32 -I"E:/biocbld/BBS-2~1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c SFF-io.c -o SFF-io.o
SFF-io.c:18:44: fatal error: arpa/inet.h: No such file or directory
compilation terminated.
make: *** [SFF-io.o] Error 1
ERROR: compilation failed for package 'rSFFreader'
* removing 'E:/biocbld/bbs-2.12-bioc/tmpdir/Rtmpua0Er1/Rinst2324502616a4/rSFFreader'
      -----------------------------------
ERROR: package installation failed