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Package 213/319HostnameOS / ArchBUILDCHECKBUILD BIN
OrderedList 1.16.0
Claudio Lottaz
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/OrderedList
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: OrderedList
Version: 1.16.0
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD check --no-vignettes OrderedList_1.16.0.tar.gz
StartedAt: 2009-10-20 18:25:12 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 18:25:54 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 42.0 seconds
RetCode: 0
Status: OK
CheckDir: OrderedList.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.4-bioc/meat/OrderedList.Rcheck'
* using R version 2.9.2 Patched (2009-08-24 r49419)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'OrderedList/DESCRIPTION' ... OK
* this is package 'OrderedList' version '1.16.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OrderedList' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

OrderedList.Rcheck/00install.out:

* Installing *source* package ‘OrderedList’ ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: splines
** help
*** installing help indices
 >>> Building/Updating help pages for package 'OrderedList'
     Formats: text html latex example 
  OL.data                           text    html    latex
  OL.result                         text    html    latex   example
  OrderedList                       text    html    latex   example
  check.test.args                   text    html    latex
  compareLists                      text    html    latex   example
  getOverlap                        text    html    latex   example
  overlap                           text    html    latex
  plot.OrderedList                  text    html    latex   example
  prepareData                       text    html    latex   example
  preparePermutations               text    html    latex
  print.OrderedList                 text    html    latex   example
  scoreOrderComparison              text    html    latex
  scoreRankings                     text    html    latex
  shuffledRandomScores              text    html    latex
** building package indices ...
* DONE (OrderedList)