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Package 216/319HostnameOS / ArchBUILDCHECKBUILD BIN
PAnnBuilder 1.6.0
Li Hong
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/PAnnBuilder
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: PAnnBuilder
Version: 1.6.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD check --no-vignettes PAnnBuilder_1.6.0.tar.gz
StartedAt: 2009-10-20 17:53:53 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 17:54:57 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 64.3 seconds
RetCode: 0
Status: OK
CheckDir: PAnnBuilder.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/PAnnBuilder.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'PAnnBuilder/DESCRIPTION' ... OK
* this is package 'PAnnBuilder' version '1.6.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'PAnnBuilder' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

PAnnBuilder.Rcheck/00install.out:

* Installing *source* package 'PAnnBuilder' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: DBI

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'PAnnBuilder'
     Formats: text html latex example chm 
  GOABuilder_DB                     text    html    latex   example chm
  HomoloGeneBuilder_DB              text    html    latex   example chm
  InParanoidBuilder_DB              text    html    latex   example chm
  PeptideAtlasBuilder_DB            text    html    latex   example chm
  bfBuilder_DB                      text    html    latex   example chm
  createAnnObjs                     text    html    latex           chm
  crossBuilder_DB                   text    html    latex   example chm
  dNameBuilder_DB                   text    html    latex   example chm
  getSrcUrl                         text    html    latex   example chm
  initClasses                       text    html    latex           chm
  intBuilder_DB                     text    html    latex   example chm
  loadFromUrl                       text    html    latex   example chm
  makeLLDB                          text    html    latex           chm
  pBaseBuilder_DB                   text    html    latex   example chm
  pSeqBuilder_DB                    text    html    latex   example chm
  processData                       text    html    latex           chm
  ptmBuilder_DB                     text    html    latex   example chm
  scopBuilder_DB                    text    html    latex   example chm
  subcellBuilder_DB                 text    html    latex   example chm
  writeData_DB                      text    html    latex           chm
  writeManPage                      text    html    latex           chm
  zzz                               text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\BBS-2~1.4-B\meat\PANNBU~1.RCH\00_PKG~1\PANNBU~1\chm\PAnnBuilder.chm


Compile time: 0 minutes, 1 second
23	Topics
242	Local links
33	Internet links
1	Graphic


Created e:\biocbld\BBS-2~1.4-B\meat\PANNBU~1.RCH\00_PKG~1\PANNBU~1\chm\PAnnBuilder.chm, 56,262 bytes
Compression decreased file by 87,994 bytes.
** building package indices ...
** MD5 sums
* DONE (PAnnBuilder)