Ringo 1.8.0
J. Toedling
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/Ringo | | Last Changed Rev: 39013 / Revision: 42512 | | Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | [ OK ] | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for file 'Ringo/DESCRIPTION' ... OK
* preparing 'Ringo':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'Ringo' ...
** libs
making DLL ...
g++ -I"e:/biocbld/bbs-2.4-bioc/R/include" -O2 -Wall -c mmeansd.cpp -o mmeansd.o
g++ -I"e:/biocbld/bbs-2.4-bioc/R/include" -O2 -Wall -c mmedian.cpp -o mmedian.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -O3 -Wall -std=gnu99 -c region_overlap.c -o region_overlap.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -O3 -Wall -std=gnu99 -c ringo_init.c -o ringo_init.o
g++ -shared -s -o Ringo.dll tmp.def mmeansd.o mmedian.o region_overlap.o ringo_init.o -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
... done
** R
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: lattice
Attaching package: 'Matrix'
The following object(s) are masked from package:stats :
contr.SAS,
contr.helmert,
contr.poly,
contr.sum,
contr.treatment,
xtabs
The following object(s) are masked from package:base :
rcond
Creating a new generic function for "plot" in "Ringo"
Creating a new generic function for "get" in "Ringo"
Creating a new generic function for "ls" in "Ringo"
** help
*** installing help indices
>>> Building/Updating help pages for package 'Ringo'
Formats: text html latex example chm
Ringo-internal text html latex chm
arrayImage text html latex example chm
asExprSet text html latex example chm
autocorr text html latex example chm
cherByThreshold text html latex example chm
cherClass text html latex example chm
chipAlongChrom text html latex example chm
computeRunningMedians text html latex example chm
compute_gc text html latex example chm
compute_sliding_t text html latex example chm
corrPlot text html latex example chm
exportCherList text html latex example chm
extractProbeAnno text html latex chm
features2Probes text html latex example chm
findChersOnSmoothed text html latex example chm
ftr2xys text html latex example chm
getFeats text html latex chm
newCER text html latex example chm
nimblegenNorm text html latex chm
nonzero text html latex example chm
plotAutocorr text html latex example chm
plotBM text html latex example chm
plot_cher text html latex chm
posToProbeAnnoEnvironment text html latex example chm
preprocess text html latex example chm
probeAnnoClass text html latex example chm
readNimblegen text html latex example chm
regionoverlap text html latex example chm
relateCERs text html latex example chm
sliding_meansd text html latex example chm
sliding_quantile text html latex example chm
twoGaussiansNull text html latex example chm
upperBoundNull text html latex example chm
validProbeAnno text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.4-bioc\meat\Ringo\chm\Ringo.chm
Compile time: 0 minutes, 1 second
35 Topics
150 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.4-bioc\meat\Ringo\chm\Ringo.chm, 75,136 bytes
Compression decreased file by 86,466 bytes.
** building package indices ...
** MD5 sums
* DONE (Ringo)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'Ringo_1.8.0.tar.gz'