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Package 264/319HostnameOS / ArchBUILDCHECKBUILD BIN
RpsiXML 1.4.1
Jitao David Zhang
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/RpsiXML
Last Changed Rev: 39202 / Revision: 42512
Last Changed Date: 2009-04-28 16:06:44 -0700 (Tue, 28 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
Package: RpsiXML
Version: 1.4.1
Command: /Users/biocbuild/BBS/utils/build-universal.sh RpsiXML_1.4.1.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R RpsiXML.buildbin-libdir
StartedAt: 2009-10-20 19:31:34 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:31:49 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 15.6 seconds
RetCode: 0
Status: OK
PackageFile: RpsiXML_1.4.1.tgz
PackageFileSize: 2.542 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=RpsiXML.buildbin-libdir RpsiXML_1.4.1.tar.gz'

* Installing *source* package ‘RpsiXML’ ...
** R
** inst
** preparing package for lazy loading
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.


Attaching package: 'hypergraph'


	The following object(s) are masked from package:AnnotationDbi :

	 head,
	 tail 


	The following object(s) are masked from package:utils :

	 head,
	 tail 

Warning in namespaceImportFrom(self, asNamespace(ns)) :
  replacing previous import: addNode
** help
*** installing help indices
 >>> Building/Updating help pages for package 'RpsiXML'
     Formats: text html latex example 
  BIOGRID.PSIMI25                   text    html    latex
  availableXrefs-methods            text    html    latex
  availableXrefs                    text    html    latex   example
  bait                              text    html    latex   example
  buildPCHypergraph                 text    html    latex   example
  complexName                       text    html    latex   example
  complexes                         text    html    latex   example
  eListHandler                      text    html    latex   example
  getAbstractByPMID                 text    html    latex   example
  graphSpeciesConverter             text    html    latex   example
  interactionType                   text    html    latex   example
  interactions                      text    html    latex   example
  interactorInfo-methods            text    html    latex
  interactorInfo                    text    html    latex   example
  interactors-methods               text    html    latex
  interactors                       text    html    latex   example
  list2Matrix                       text    html    latex
  null2na                           text    html    latex   example
  numInteractions-methods           text    html    latex
  numInteractors-methods            text    html    latex
  organismName-methods              text    html    latex
  parseComplex                      text    html    latex
  parsePsimi25Interaction           text    html    latex   example
  psimi25Complex-class              text    html    latex   example
  psimi25ComplexEntry-class         text    html    latex   example
  psimi25Experiment-class           text    html    latex   example
  psimi25Graph-class                text    html    latex   example
  psimi25Hypergraph-class           text    html    latex   example
  psimi25Interaction-class          text    html    latex   example
  psimi25InteractionEntry-class     text    html    latex   example
  psimi25Interactor-class           text    html    latex   example
  psimi25Source-class               text    html    latex   example
  psimi25XML2Graph                  text    html    latex   example
  releaseDate                       text    html    latex   example
  separateXMLDataByExpt             text    html    latex   example
  sourceDb-methods                  text    html    latex
  sourceDb                          text    html    latex
  sourceId-methods                  text    html    latex
  sourceId                          text    html    latex
  taxId-methods                     text    html    latex
  taxId                             text    html    latex   example
  translateID-methods               text    html    latex
  translateID                       text    html    latex   example
  uniprot-methods                   text    html    latex
  uniprot                           text    html    latex   example
  validatePSIMI25                   text    html    latex   example
** building package indices ...
* DONE (RpsiXML)