Ruuid 1.22.0
Biocore Team c/o BioC user list
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/Ruuid | | Last Changed Rev: 39013 / Revision: 42512 | | Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | [ OK ] |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
INSTALLATION WITH 'R CMD INSTALL --preclean --library=Ruuid.buildbin-libdir Ruuid_1.22.0.tar.gz'
* Installing *source* package ‘Ruuid’ ...
checking for pkg-config... /usr/local/bin/pkg-config
checking for glib-config... /usr/local/bin/glib-config
checking for glib-2.0... yes
checking PKG_CFLAGS... -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include
checking PKG_LIBS... -L/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib -lglib-2.0 -lintl
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking /usr/include/unistd.h usability... yes
checking /usr/include/unistd.h presence... yes
checking for /usr/include/unistd.h... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c Rinit.c -o Rinit.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c Ruuid.c -o Ruuid.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c clear.c -o clear.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c compare.c -o compare.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c copy.c -o copy.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c gen_uuid.c -o gen_uuid.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c isnull.c -o isnull.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c pack.c -o pack.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c parse.c -o parse.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c unpack.c -o unpack.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c unparse.c -o unparse.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386 -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -mtune=core2 -g -O2 -c uuid_time.c -o uuid_time.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o Ruuid.so Rinit.o Ruuid.o clear.o compare.o copy.o gen_uuid.o isnull.o pack.o parse.o unpack.o unparse.o uuid_time.o -L/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib -lglib-2.0 -lintl -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
>>> Building/Updating help pages for package 'Ruuid'
Formats: text html latex example
Ruuid-class text html latex example
getuuid text html latex example
uuidt-class text html latex example
** building package indices ...
* DONE (Ruuid)
INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --library=Ruuid.buildbin-libdir --libs-only Ruuid_1.22.0.tar.gz'
* Installing *source* package ‘Ruuid’ ...
checking for pkg-config... /usr/local/bin/pkg-config
checking for glib-config... /usr/local/bin/glib-config
checking for glib-2.0... yes
checking PKG_CFLAGS... -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include
checking PKG_LIBS... -L/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib -lglib-2.0 -lintl
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking /usr/include/unistd.h usability... yes
checking /usr/include/unistd.h presence... yes
checking for /usr/include/unistd.h... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c Rinit.c -o Rinit.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c Ruuid.c -o Ruuid.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c clear.c -o clear.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c compare.c -o compare.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c copy.c -o copy.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c gen_uuid.c -o gen_uuid.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c isnull.c -o isnull.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c pack.c -o pack.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c parse.c -o parse.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c unpack.c -o unpack.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c unparse.c -o unparse.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc -I/usr/local/include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fPIC -g -O2 -c uuid_time.c -o uuid_time.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o Ruuid.so Rinit.o Ruuid.o clear.o compare.o copy.o gen_uuid.o isnull.o pack.o parse.o unpack.o unparse.o uuid_time.o -L/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib -lglib-2.0 -lintl -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (Ruuid)