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Package 22/319HostnameOS / ArchBUILDCHECKBUILD BIN
annotate 1.22.0
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Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/annotate
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
Package: annotate
Version: 1.22.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh annotate_1.22.0.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R annotate.buildbin-libdir
StartedAt: 2009-10-20 19:16:45 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:16:57 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 11.9 seconds
RetCode: 0
Status: OK
PackageFile: annotate_1.22.0.tgz
PackageFileSize: 1.807 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=annotate.buildbin-libdir annotate_1.22.0.tar.gz'

* Installing *source* package ‘annotate’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'annotate'
     Formats: text html latex example 
Note: removing empty section \value in file 'ACCNUMStats.Rd'
  ACCNUMStats                       text    html    latex   example
  GO2heatmap                        text    html    latex   example
  GOmnplot                          text    html    latex   example
  HTMLPage-class                    text    html    latex   example
  LL2homology                       text    html    latex   example
  PMIDAmat                          text    html    latex   example
  PWAmat                            text    html    latex   example
  UniGeneQuery                      text    html    latex   example
  accessionToUID                    text    html    latex   example
  annPkgName                        text    html    latex   example
  aqListGOIDs                       text    html    latex   example
  buildChromLocation                text    html    latex   example
  buildPubMedAbst                   text    html    latex   example
  chrCats                           text    html    latex   example
  chromLocation-class               text    html    latex   example
  compatibleVersions                text    html    latex   example
  dropECode                         text    html    latex   example
  entrezGeneByID                    text    html    latex   example
Note: removing empty section \seealso in file 'entrezGeneQuery.Rd'
  entrezGeneQuery                   text    html    latex   example
  filterGOByOntology                text    html    latex   example
  findNeighbors                     text    html    latex   example
  genbank                           text    html    latex   example
  genelocator                       text    html    latex   example
  getAnnMap                         text    html    latex   example
  getEvidence                       text    html    latex   example
  getGOTerm                         text    html    latex   example
  getOntology                       text    html    latex   example
  getPMInfo                         text    html    latex   example
  getSYMBOL                         text    html    latex   example
  getSeq4Acc                        text    html    latex   example
  getTDRows                         text    html    latex
  hasGOannote                       text    html    latex   example
  hgByChroms                        text    html    latex   example
  hgCLengths                        text    html    latex   example
  hgu95AProbLocs                    text    html    latex
  hgu95Achroloc                     text    html    latex   example
  hgu95Achrom                       text    html    latex   example
  hgu95All                          text    html    latex   example
  hgu95Asym                         text    html    latex   example
  homoData-class                    text    html    latex   example
  htmlpage                          text    html    latex   example
  isValidkey                        text    html    latex   example
  makeAnchor                        text    html    latex   example
  mapOrgs                           text    html    latex
  neighborGeneFinder                text    html    latex   example
  p2LL                              text    html    latex   example
  pm.abstGrep                       text    html    latex   example
  pm.getabst                        text    html    latex   example
  pm.titles                         text    html    latex   example
  pmAbst2HTML                       text    html    latex   example
  pmid2MIAME                        text    html    latex   example
  pmidQuery                         text    html    latex   example
  probesByLL                        text    html    latex   example
  pubMedAbst-class                  text    html    latex   example
  pubmed                            text    html    latex   example
  readGEOAnn                        text    html    latex   example
  serializeEnv                      text    html    latex   example
  setRepository                     text    html    latex   example
  updateSymbolsToValidKeys          text    html    latex   example
  usedChromGenes                    text    html    latex   example
** building package indices ...
* DONE (annotate)