multtest 2.0.0
Katherine S. Pollard
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/multtest | | Last Changed Rev: 39013 / Revision: 42512 | | Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/multtest.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'multtest/DESCRIPTION' ... OK
* this is package 'multtest' version '2.0.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'multtest' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
boot.null: no visible global function definition for 'clusterApply'
boot.null: no visible global function definition for 'clusterApplyLB'
EBMTP: no visible global function definition for 'makeCluster'
EBMTP: no visible global function definition for 'clusterEvalQ'
EBMTP: no visible global function definition for 'stopCluster'
EBMTP: no visible binding for global variable 'V'
EBMTP: no visible binding for global variable 'S'
lmX : <anonymous>: no visible global function definition for 'rlm'
lmY : <anonymous>: no visible global function definition for 'rlm'
MTP: no visible global function definition for 'makeCluster'
MTP: no visible global function definition for 'clusterEvalQ'
MTP: no visible global function definition for 'stopCluster'
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* Installing *source* package 'multtest' ...
** libs
making DLL ...
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c Rpack.c -o Rpack.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c VScount.c -o VScount.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c block_sampling_fixed.c -o block_sampling_fixed.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c bootloop.c -o bootloop.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c mt.c -o mt.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c pairt_sampling.c -o pairt_sampling.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c random.c -o random.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c sampling.c -o sampling.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c sampling_fixed.c -o sampling_fixed.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c stat_func.c -o stat_func.o
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -c stat_order.c -o stat_order.o
gcc -shared -s -o multtest.dll tmp.def Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
... done
** R
** data
** inst
** preparing package for lazy loading
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Creating a new generic function for "as.list" in "multtest"
** help
*** installing help indices
>>> Building/Updating help pages for package 'multtest'
Formats: text html latex example chm
EBMTP-class text html latex example chm
EBMTP text html latex example chm
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boot.null text html latex example chm
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fwer2gfwer text html latex example chm
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golub text html latex chm
meanX text html latex example chm
mt.internal text html latex chm
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mt.reject text html latex example chm
mt.sample.teststat text html latex example chm
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Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\BBS-2~1.4-B\meat\MULTTE~1.RCH\00_PKG~1\multtest\chm\multtest.chm
Compile time: 0 minutes, 1 second
22 Topics
191 Local links
48 Internet links
1 Graphic
Created e:\biocbld\BBS-2~1.4-B\meat\MULTTE~1.RCH\00_PKG~1\multtest\chm\multtest.chm, 121,137 bytes
Compression decreased file by 128,133 bytes.
** building package indices ...
** MD5 sums
* DONE (multtest)