pcaMethods 1.22.0
Wolfram Stacklies
| Bioconductor Changelog | | Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/pcaMethods | | Last Changed Rev: 39013 / Revision: 42512 | | Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/pcaMethods.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'pcaMethods/DESCRIPTION' ... OK
* this is package 'pcaMethods' version '1.22.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pcaMethods' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK
* Installing *source* package 'pcaMethods' ...
** R
** data
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Attaching package: 'pls'
The following object(s) are masked from package:stats :
loadings
Creating a new generic function for "print" in "pcaMethods"
Creating a new generic function for "biplot" in "pcaMethods"
Creating a new generic function for "summary" in "pcaMethods"
Creating a new generic function for "fitted" in "pcaMethods"
** help
*** installing help indices
>>> Building/Updating help pages for package 'pcaMethods'
Formats: text html latex example chm
Q2 text html latex example chm
asExprSet text html latex chm
biplot.pcaRes text html latex example chm
bpca text html latex example chm
checkData text html latex chm
class.nlpcaNet text html latex chm
class.nniRes text html latex chm
class.pcaRes text html latex chm
fitted.pcaRes text html latex example chm
helix text html latex chm
kEstimate text html latex example chm
kEstimateFast text html latex example chm
leverage text html latex example chm
llsImpute text html latex example chm
metaboliteData text html latex chm
metaboliteDataComplete text html latex chm
nipalsPca text html latex example chm
nlpca text html latex example chm
nni text html latex example chm
pca text html latex example chm
plotPcs text html latex example chm
plotR2 text html latex chm
ppca text html latex example chm
predict.pcaRes text html latex example chm
prep text html latex example chm
residuals.pcaRes text html latex example chm
robustPca text html latex example chm
robustSvd text html latex example chm
slplot text html latex example chm
svdImpute text html latex example chm
svdPca text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\BBS-2~1.4-B\meat\PCAMET~1.RCH\00_PKG~1\PCAMET~1\chm\pcaMethods.chm
Compile time: 0 minutes, 0 seconds
32 Topics
136 Local links
3 Internet links
1 Graphic
Created e:\biocbld\BBS-2~1.4-B\meat\PCAMET~1.RCH\00_PKG~1\PCAMET~1\chm\pcaMethods.chm, 70,807 bytes
Compression decreased file by 67,332 bytes.
** building package indices ...
** MD5 sums
* DONE (pcaMethods)