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Package 254/319HostnameOS / ArchBUILDCHECKBUILD BIN
rflowcyt 1.16.0
N. LeMeur
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/rflowcyt
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: rflowcyt
Version: 1.16.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD build rflowcyt
StartedAt: 2009-10-20 14:24:40 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 14:27:44 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 183.5 seconds
RetCode: 0
Status: OK
PackageFile: rflowcyt_1.16.0.tar.gz
PackageFileSize: 4.105 MiB

Command output

* checking for file 'rflowcyt/DESCRIPTION' ... OK
* preparing 'rflowcyt':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'rflowcyt' ...
** R
** inst
** preparing package for lazy loading
Loading required package: spam
Package 'spam' is loaded. Spam version 0.15-5 (2009-09-13).
Type demo( spam) for some demos, help( Spam) for an overview
of this package.
Help for individual functions is optained byadding the
suffix '.spam' to the function name, e.g. 'help(chol.spam)'.

Attaching package: 'spam'


	The following object(s) are masked from package:base :

	 backsolve,
	 forwardsolve 

 Try help(fields) for an overview of this library
fields web: http://www.image.ucar.edu/Software/Fields 
Loading required package: grid
Loading required package: lattice
Loading required package: akima
locfit 1.5-4 	 2007-11-27 
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
pcaPP 0.1-1 loaded
Scalable Robust Estimators with High Breakdown Point (version 1.0-00)
Loading required package: sp

Spatial Point Pattern Analysis Code in S-Plus

 Version 2 - Spatial and Space-Time analysis
Loading required package: splines

Attaching package: 'survival'


	The following object(s) are masked from package:robustbase :

	 heart 


Attaching package: 'xtable'


	The following object(s) are masked from package:spam :

	 display 

KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
** help
*** installing help indices
 >>> Building/Updating help pages for package 'rflowcyt'
     Formats: text html latex example chm 
  ContourScatterPlot                text    html    latex   example chm
  FCS-class                         text    html    latex   example chm
  FCSgate-class                     text    html    latex   example chm
Note: removing empty section \examples in file 'FCSggobi-class.Rd'
Note: removing empty section \examples in file 'FCSggobi-class.Rd'
  FCSggobi-class                    text    html    latex           chm
  FCSmetadata-class                 text    html    latex   example chm
  FCSsummary-class                  text    html    latex   example chm
  FHCRC.HVTNFCS                     text    html    latex   example chm
  ImageParCoord                     text    html    latex   example chm
  KS.flowcytest                     text    html    latex   example chm
  MODE                              text    html    latex   example chm
  PercentPos.FCS                    text    html    latex   example chm
  ProbBin.FCS                       text    html    latex   example chm
  ProbBin.flowcytest                text    html    latex   example chm
  ROC.FCS                           text    html    latex   example chm
  VRC.HVTNFCS                       text    html    latex   example chm
  WLR.flowcytest                    text    html    latex   example chm
  add.parallel.coordinates          text    html    latex   example chm
  add.parallelCoordinates           text    html    latex   example chm
  addParameter-methods              text    html    latex           chm
  boxplot.FCS                       text    html    latex   example chm
  breakpoints.ProbBin               text    html    latex   example chm
  checkvars-methods                 text    html    latex           chm
  coerce-FCSformat                  text    html    latex   example chm
  coerce-methods                    text    html    latex           chm
  convertS3toS4                     text    html    latex   example chm
  createGate                        text    html    latex   example chm
  cytoSet-class                     text    html    latex   example chm
  dim.FCS-methods                   text    html    latex           chm
  emp.f                             text    html    latex   example chm
  equals-methods                    text    html    latex           chm
  extractGateHistory                text    html    latex   example chm
  extractGatedData                  text    html    latex   example chm
  fcs.type                          text    html    latex   example chm
  fixvars-methods                   text    html    latex           chm
  fluors-methods                    text    html    latex           chm
  gate.IPC                          text    html    latex   example chm
  get.h                             text    html    latex   example chm
  get.num.modes                     text    html    latex   example chm
  get.p                             text    html    latex   example chm
  ggobi-methods                     text    html    latex           chm
  legend.CSP                        text    html    latex   example chm
  make.grid                         text    html    latex   example chm
  metaData-methods                  text    html    latex           chm
  pairs.CSP                         text    html    latex   example chm
  parallelCoordinates               text    html    latex   example chm
  pkci2.flowcytest                  text    html    latex   example chm
  plot-methods                      text    html    latex           chm
  plot.ProbBin.FCS                  text    html    latex   example chm
  plot2sets.FCS                     text    html    latex   example chm
  plotECDF.FCS                      text    html    latex   example chm
  plotQA.FCS                        text    html    latex   example chm
  plotdensity.FCS                   text    html    latex   example chm
  plotvar.FCS                       text    html    latex   example chm
  print-methods                     text    html    latex           chm
  read.FCS                          text    html    latex   example chm
  read.series.FCS                   text    html    latex   example chm
Note: removing empty section \value in file 'rect.box.idx.Rd'
Note: removing empty section \value in file 'rect.box.idx.Rd'
  rect.box.idx                      text    html    latex   example chm
  rflowcyt-defunct                  text    html    latex           chm
  runflowcytests                    text    html    latex   example chm
  show-methods                      text    html    latex           chm
  showgate.FCS                      text    html    latex   example chm
  standard                          text    html    latex   example chm
  subset-methods                    text    html    latex           chm
  subset2-methods                   text    html    latex           chm
  subset2assign-methods             text    html    latex           chm
  subsetassign-methods              text    html    latex           chm
  summary-methods                   text    html    latex           chm
  summary.ProbBin.FCS               text    html    latex   example chm
  xgobi.FCS                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\meat\rflowcyt\chm\rflowcyt.chm





Compile time: 0 minutes, 2 seconds

70	Topics

567	Local links

1	Internet link

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\meat\rflowcyt\chm\rflowcyt.chm, 172,859 bytes

Compression decreased file by 293,276 bytes.

** building package indices ...
** MD5 sums
* DONE (rflowcyt)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'rflowcyt_1.16.0.tar.gz'