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Package 291/319HostnameOS / ArchBUILDCHECKBUILD BIN
spikeLI 2.4.0
Enrico Carlon
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/spikeLI
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: spikeLI
Version: 2.4.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD check --no-vignettes spikeLI_2.4.0.tar.gz
StartedAt: 2009-10-20 18:29:59 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 18:30:29 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 29.6 seconds
RetCode: 0
Status: OK
CheckDir: spikeLI.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/spikeLI.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'spikeLI/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'spikeLI' version '2.4.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'spikeLI' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
collapse: no visible binding for global variable 'hgu'
Ivsc: no visible binding for global variable 'hgu'
IvsDG: no visible binding for global variable 'hgu'
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

spikeLI.Rcheck/00install.out:

* Installing *source* package 'spikeLI' ...
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
 >>> Building/Updating help pages for package 'spikeLI'
     Formats: text html latex example chm 
  IvsDG                             text    html    latex   example chm
  Ivsc                              text    html    latex   example chm
  SPIKE_IN                          text    html    latex   example chm
  SPIKE_IN95                        text    html    latex   example chm
  SPIKE_INA                         text    html    latex   example chm
  SPIKE_INB                         text    html    latex   example chm
  SPIKE_INH                         text    html    latex   example chm
  collapse                          text    html    latex   example chm
  conc133                           text    html    latex   example chm
  conc95                            text    html    latex   example chm
  hgu                               text    html    latex   example chm
  spikeLI.package                   text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\BBS-2~1.4-B\meat\SPIKEL~1.RCH\00_PKG~1\spikeLI\chm\spikeLI.chm


Compile time: 0 minutes, 1 second
13	Topics
113	Local links
0	Internet links
1	Graphic


Created e:\biocbld\BBS-2~1.4-B\meat\SPIKEL~1.RCH\00_PKG~1\spikeLI\chm\spikeLI.chm, 26,628 bytes
Compression decreased file by 11,496 bytes.
** building package indices ...
** MD5 sums
* DONE (spikeLI)