Package: yaqcaffy

Version: 1.4.0

Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD build yaqcaffy

StartedAt: 2009-10-20 16:07:18 -0700 (Tue, 20 Oct 2009)

EndedAt: 2009-10-20 16:08:53 -0700 (Tue, 20 Oct 2009)

EllapsedTime: 95.3 seconds

RetCode: 0

Status: OK

PackageFile: yaqcaffy_1.4.0.tar.gz

PackageFileSize: 220.7 KiB

* checking for file 'yaqcaffy/DESCRIPTION' ... OK
* preparing 'yaqcaffy':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package ‘yaqcaffy’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: genefilter
Loading required package: gcrma
Loading required package: Biostrings
Loading required package: IRanges

Attaching package: 'IRanges'


	The following object(s) are masked from package:base :

	 cbind,
	 duplicated,
	 order,
	 pmax,
	 pmax.int,
	 pmin,
	 pmin.int,
	 rank,
	 rbind,
	 rep.int,
	 sapply,
	 sort,
	 table,
	 unique 

Creating a new generic function for "merge" in "yaqcaffy"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'yaqcaffy'
     Formats: text html latex example 
  YAQCStats-accessor                text    html    latex
  YAQCStats-class                   text    html    latex
  getAllInt                         text    html    latex   example
  getBioProbes                      text    html    latex   example
  getOutliers                       text    html    latex   example
  getQCRatios                       text    html    latex   example
  getRatioProbes                    text    html    latex   example
  getSpikeProbes                    text    html    latex   example
  morespikes                        text    html    latex
  reprodPlot                        text    html    latex   example
  yaqc-methods                      text    html    latex
  yaqc.affy                         text    html    latex   example
  yaqc.plot                         text    html    latex   example
  yaqc.summary                      text    html    latex   example
** building package indices ...
* DONE (yaqcaffy)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'yaqcaffy_1.4.0.tar.gz'