Package: chipseq

Version: 0.4.1

Command: chmod a+r chipseq -R && E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build chipseq

StartedAt: 2010-10-04 15:17:03 -0700 (Mon, 04 Oct 2010)

EndedAt: 2010-10-04 15:19:22 -0700 (Mon, 04 Oct 2010)

EllapsedTime: 139.0 seconds

RetCode: 0

Status:  OK

PackageFile: chipseq_0.4.1.tar.gz

PackageFileSize: 3.879 MiB

* checking for file 'chipseq/DESCRIPTION' ... OK
* preparing 'chipseq':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'chipseq' ...
** libs
  making DLL ...
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include"         -O3 -Wall  -std=gnu99 -c rlesumprod.c -o rlesumprod.o
rlesumprod.c: In function 'rle_sum_prod':
rlesumprod.c:24: warning: operation on 'i1' may be undefined
rlesumprod.c:25: warning: operation on 'i2' may be undefined
rlesumprod.c:27: warning: operation on 'i1' may be undefined
rlesumprod.c:28: warning: operation on 'i2' may be undefined
rlesumprod.c:34: warning: operation on 'i1' may be undefined
rlesumprod.c:35: warning: operation on 'i2' may be undefined
rlesumprod.c: In function 'rle_sum_any':
rlesumprod.c:61: warning: operation on 'i1' may be undefined
rlesumprod.c:62: warning: operation on 'i2' may be undefined
gcc -shared -s -static-libgcc -o chipseq.dll tmp.def rlesumprod.o -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
installing to E:/biocbld/bbs-2.6-bioc/tmpdir/Rinst183652062/chipseq/libs
  ... done
** R
** data
** inst
** preparing package for lazy loading

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, mapply, order, paste, pmax, pmax.int, pmin, pmin.int,
    rbind, rep.int, table

Loading required package: Biostrings
Loading required package: lattice
Loading required package: Rsamtools
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (chipseq)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'chipseq/inst/Scripts/figs' is empty
* building 'chipseq_0.4.1.tar.gz'