Package: MEDME

Version: 1.13.0

Command: E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings MEDME_1.13.0.tar.gz

StartedAt: 2011-05-09 14:31:57 -0700 (Mon, 09 May 2011)

EndedAt: 2011-05-09 14:33:42 -0700 (Mon, 09 May 2011)

EllapsedTime: 105.2 seconds

RetCode: 0

Status:  OK

CheckDir: MEDME.Rcheck

Warnings: 0

* using log directory 'E:/biocbld/bbs-2.9-bioc/meat/MEDME.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-04-17 r55484)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'MEDME/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'MEDME' version '1.13.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'MEDME' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'MEDME' ...
** libs
gcc  -I"E:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -c MEDMEweight.c -o MEDMEweight.o
MEDMEweight.c: In function 'MEDMEweight':
MEDMEweight.c:36:10: warning: 'B' may be used uninitialized in this function
MEDMEweight.c:36:12: warning: 'C' may be used uninitialized in this function
MEDMEweight.c:36:14: warning: 'D' may be used uninitialized in this function
MEDMEweight.c:36:16: warning: 'E' may be used uninitialized in this function
MEDMEweight.c:36:19: warning: 'Min' may be used uninitialized in this function
MEDMEweight.c:36:24: warning: 'Max' may be used uninitialized in this function
MEDMEweight.c:30:10: warning: 'weight' may be used uninitialized in this function
gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LE:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.9-bioc/meat/MEDME.Rcheck/MEDME/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'MEDME.rnw' 
** testing if installed package can be loaded

* DONE (MEDME)

name	user	system	elapsed
CGcount	5.74	0.27	6.34
MEDME	3.66	0.28	4.03
MEDMEset-class	0.01	0.00	0.01
predict	3.55	0.34	3.99
smooth	0.39	0.02	0.58