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Package 314/462HostnameOS / ArchBUILDCHECKBUILD BIN
OLIN 1.31.0
Matthias Futschik
Snapshot Date: 2011-05-09 07:20:56 -0700 (Mon, 09 May 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/OLIN
Last Changed Rev: 54810 / Revision: 55359
Last Changed Date: 2011-04-13 18:14:51 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: OLIN
Version: 1.31.0
Command: /home/biocbuild/bbs-2.9-bioc/R/bin/R CMD check --no-vignettes --timings OLIN_1.31.0.tar.gz
StartedAt: 2011-05-09 13:30:20 -0700 (Mon, 09 May 2011)
EndedAt: 2011-05-09 13:31:44 -0700 (Mon, 09 May 2011)
EllapsedTime: 84.9 seconds
RetCode: 0
Status:  OK 
CheckDir: OLIN.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.9-bioc/meat/OLIN.Rcheck’
* using R version 2.14.0 Under development (unstable) (2011-04-18 r55504)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘OLIN/DESCRIPTION’ ... OK
* this is package ‘OLIN’ version ‘1.31.0’
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘OLIN’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    doc   5.6Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OLIN.Rcheck/00install.out:

* installing *source* package ‘OLIN’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: akima
Loading required package: lattice
locfit 1.5-6 	 2010-01-20 
Loading required package: limma
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘OLIN.Rnw’ 
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

* DONE (OLIN)

OLIN.Rcheck/OLIN-Ex.timings:

nameusersystemelapsed
anovaint0.4080.0080.420
anovapin0.2960.0040.296
anovaplate0.2320.0040.237
anovaspatial0.7280.0240.752
backgroundCorrect20.8480.0200.872
bas0.0640.0000.064
colorbar.mxy0.0600.0040.062
fdr.int000
fdr.int2000
fdr.spatial000
fdr.spatial2000
fgbg.visu0.2240.0080.230
ino0.3160.0040.322
lin1.2560.0041.258
m2v0.0760.0000.073
ma.matrix0.4440.0000.448
ma.vector0.5920.0000.593
mxy.abs.plot0.1040.0000.103
mxy.plot0.1040.0040.108
mxy2.plot0.0760.0040.081
oin1.4040.0001.407
olin28.126 0.00828.379
p.int0.0000.0000.001
p.int20.0000.0000.001
p.spatial0.0000.0000.001
p.spatial2000
sig.mask000
sigint.plot000
sigint.plot2000
sigxy.plot000
sigxy.plot2000
v2m0.0560.0000.054