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BioC experimental data: CHECK report for ALLMLL on zin2

This page was generated on 2015-10-07 16:20:47 -0700 (Wed, 07 Oct 2015).

Package 10/241HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ALLMLL 1.8.0
B. M. Bolstad
Snapshot Date: 2015-10-07 07:15:35 -0700 (Wed, 07 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_1/experiment/pkgs/ALLMLL
Last Changed Rev: 3279 / Revision: 3442
Last Changed Date: 2015-04-16 13:16:53 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK [ OK ]UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK 

Summary

Package: ALLMLL
Version: 1.8.0
Command: /home/biocbuild/bbs-3.1-bioc/R/bin/R CMD check --no-vignettes --timings ALLMLL_1.8.0.tar.gz
StartedAt: 2015-10-07 09:05:38 -0700 (Wed, 07 Oct 2015)
EndedAt: 2015-10-07 09:06:06 -0700 (Wed, 07 Oct 2015)
EllapsedTime: 28.1 seconds
RetCode: 0
Status:  OK 
CheckDir: ALLMLL.Rcheck
Warnings: 0

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.1-bioc/R/bin/R CMD check --no-vignettes --timings ALLMLL_1.8.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.1-data-experiment/meat/ALLMLL.Rcheck’
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ALLMLL/DESCRIPTION’ ... OK
* this is package ‘ALLMLL’ version ‘1.8.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ALLMLL’ can be installed ... [1s/2s] OK
* checking installed package size ... NOTE
  installed size is 25.7Mb
  sub-directories of 1Mb or more:
    data  25.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.1-data-experiment/meat/ALLMLL.Rcheck/00check.log’
for details.

ALLMLL.Rcheck/00install.out:

* installing *source* package ‘ALLMLL’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (ALLMLL)