Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:32:00 -0400 (Wed, 15 Apr 2020).
Package 437/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
DepecheR 1.2.2 Jakob Theorell
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: DepecheR |
Version: 1.2.2 |
Command: rm -rf DepecheR.buildbin-libdir && mkdir DepecheR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DepecheR.buildbin-libdir DepecheR_1.2.2.tar.gz |
StartedAt: 2020-04-15 08:34:38 -0400 (Wed, 15 Apr 2020) |
EndedAt: 2020-04-15 08:35:41 -0400 (Wed, 15 Apr 2020) |
EllapsedTime: 62.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: DepecheR_1.2.2.zip |
PackageFileSize: 2.84 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf DepecheR.buildbin-libdir && mkdir DepecheR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DepecheR.buildbin-libdir DepecheR_1.2.2.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'DepecheR' ... ** using staged installation ** libs C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c Clusterer.cpp -o Clusterer.o Clusterer.cpp: In member function 'double Clusterer::cluster_norm(const RowMatrixXd&, const RowMatrixXd&, Eigen::VectorXi, double)': Clusterer.cpp:204:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(unsigned int i = 0; i<centers.cols(); i++){ ^ Clusterer.cpp:205:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(unsigned int j = 0; j<centers.rows(); j++){ ^ C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c InterfaceUtils.cpp -o InterfaceUtils.o C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o DepecheR.dll tmp.def Clusterer.o InterfaceUtils.o RcppExports.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR if test -e "/usr/bin/strip" && test -e "/bin/uname" && [[ `uname` == "Linux" ]] ; then /usr/bin/strip --strip-debug DepecheR.dll; fi rm *.o installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/DepecheR.buildbin-libdir/00LOCK-DepecheR/00new/DepecheR/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DepecheR' finding HTML links ... done DepecheR-package html dAllocate html dColorPlot html dColorVector html dContours html dDensityPlot html dResidualPlot html dScale html dSplsda html dViolins html dWilcox html depeche html groupProbPlot html microClust html testData html testDataDepeche html testDataSNE html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DepecheR' ... ** libs C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c Clusterer.cpp -o Clusterer.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c InterfaceUtils.cpp -o InterfaceUtils.o C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I../inst/include -pthread -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o DepecheR.dll tmp.def Clusterer.o InterfaceUtils.o RcppExports.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR if test -e "/usr/bin/strip" && test -e "/bin/uname" && [[ `uname` == "Linux" ]] ; then /usr/bin/strip --strip-debug DepecheR.dll; fi rm *.o installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/DepecheR.buildbin-libdir/DepecheR/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'DepecheR' as DepecheR_1.2.2.zip * DONE (DepecheR)