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INSTALL report for EMDomics on tokay1

This page was generated on 2020-04-15 12:24:59 -0400 (Wed, 15 Apr 2020).

Package 516/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EMDomics 2.16.0
Sadhika Malladi and Daniel Schmolze
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/EMDomics
Branch: RELEASE_3_10
Last Commit: 24ffc14
Last Changed Date: 2019-10-29 13:09:18 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: EMDomics
Version: 2.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/EMDomics_2.16.0.tar.gz && rm -rf EMDomics.buildbin-libdir && mkdir EMDomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EMDomics.buildbin-libdir EMDomics_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL EMDomics_2.16.0.zip && rm EMDomics_2.16.0.tar.gz EMDomics_2.16.0.zip
StartedAt: 2020-04-14 19:08:24 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:08:59 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 35.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/EMDomics_2.16.0.tar.gz && rm -rf EMDomics.buildbin-libdir && mkdir EMDomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EMDomics.buildbin-libdir EMDomics_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL EMDomics_2.16.0.zip && rm EMDomics_2.16.0.tar.gz EMDomics_2.16.0.zip
###
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100 96609  100 96609    0     0  2654k      0 --:--:-- --:--:-- --:--:-- 2948k

install for i386

* installing *source* package 'EMDomics' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EMDomics'
    finding HTML links ... done
    CVMomics                                html  
    EMDomics                                html  
    KSomics                                 html  
    calculate_cvm                           html  
    calculate_cvm_gene                      html  
    calculate_emd                           html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpyau706/R.INSTALL1bd027523e79/EMDomics/man/calculate_emd.Rd:101: file link 'emd2d' in package 'emdist' does not exist and so has been treated as a topic
    calculate_emd_gene                      html  
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpyau706/R.INSTALL1bd027523e79/EMDomics/man/calculate_emd_gene.Rd:31: file link 'emd2d' in package 'emdist' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpyau706/R.INSTALL1bd027523e79/EMDomics/man/calculate_emd_gene.Rd:47: file link 'emd2d' in package 'emdist' does not exist and so has been treated as a topic
    calculate_ks                            html  
    calculate_ks_gene                       html  
    emdomics-package                        html  
    plot_cvm_density                        html  
    plot_cvmnull                            html  
    plot_cvmperms                           html  
    plot_emd_density                        html  
    plot_emdnull                            html  
    plot_emdperms                           html  
    plot_ks_density                         html  
    plot_ksnull                             html  
    plot_ksperms                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EMDomics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EMDomics' as EMDomics_2.16.0.zip
* DONE (EMDomics)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'EMDomics' successfully unpacked and MD5 sums checked