VJ Carey
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/ldblock |
| Branch: RELEASE_3_10 |
| Last Commit: 1a9e941 |
| Last Changed Date: 2019-10-29 13:09:24 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:25:23 -0400 (Wed, 15 Apr 2020).
| Package 897/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ldblock 1.16.0 VJ Carey
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: ldblock |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/ldblock_1.16.0.tar.gz && rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ldblock.buildbin-libdir ldblock_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL ldblock_1.16.0.zip && rm ldblock_1.16.0.tar.gz ldblock_1.16.0.zip |
| StartedAt: 2020-04-14 20:05:18 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:06:56 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 98.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/ldblock_1.16.0.tar.gz && rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ldblock.buildbin-libdir ldblock_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL ldblock_1.16.0.zip && rm ldblock_1.16.0.tar.gz ldblock_1.16.0.zip
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install for i386
* installing *source* package 'ldblock' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ldblock'
finding HTML links ... done
downloadPopByChr html
expandSnpSet html
hmld html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpg1Vwee/R.INSTALL1a284ed56864/ldblock/man/hmld.Rd:14: file link 'read.delim' in package 'utils' does not exist and so has been treated as a topic
ldByGene html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpg1Vwee/R.INSTALL1a284ed56864/ldblock/man/ldByGene.Rd:22: file link 'readVcf' in package 'VariantAnnotation' does not exist and so has been treated as a topic
ldblock-package html
ldmat-ldstruct-method html
ldmat html
ldstruct-class html
s3_1kg html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmpg1Vwee/R.INSTALL1a284ed56864/ldblock/man/s3_1kg.Rd:26: file link 'TabixFile' in package 'Rsamtools' does not exist and so has been treated as a topic
stack1kg html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ldblock' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ldblock' as ldblock_1.16.0.zip
* DONE (ldblock)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'ldblock' successfully unpacked and MD5 sums checked