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BUILD BIN report for methylPipe on tokay1

This page was generated on 2020-04-15 12:23:30 -0400 (Wed, 15 Apr 2020).

Package 1027/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methylPipe 1.20.0
Kamal Kishore
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/methylPipe
Branch: RELEASE_3_10
Last Commit: b631764
Last Changed Date: 2019-10-29 13:09:03 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: methylPipe
Version: 1.20.0
Command: rm -rf methylPipe.buildbin-libdir && mkdir methylPipe.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylPipe.buildbin-libdir methylPipe_1.20.0.tar.gz
StartedAt: 2020-04-15 09:09:24 -0400 (Wed, 15 Apr 2020)
EndedAt: 2020-04-15 09:10:56 -0400 (Wed, 15 Apr 2020)
EllapsedTime: 91.4 seconds
RetCode: 0
Status:  OK  
PackageFile: methylPipe_1.20.0.zip
PackageFileSize: 1.106 MiB

Command output

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### Running command:
###
###   rm -rf methylPipe.buildbin-libdir && mkdir methylPipe.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylPipe.buildbin-libdir methylPipe_1.20.0.tar.gz
###
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install for i386

* installing *source* package 'methylPipe' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c R_init_methylPipe.c -o R_init_methylPipe.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c binning.c -o binning.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o methylPipe.dll tmp.def R_init_methylPipe.o binning.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/methylPipe.buildbin-libdir/00LOCK-methylPipe/00new/methylPipe/libs/i386
** R
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'methylPipe'
    finding HTML links ... done
    BSdata-class                            html  
    finding level-2 HTML links ... done

    BSdataSet-class                         html  
    BSprepare                               html  
    GEcollection-class                      html  
    GElist-class                            html  
    chiCombP                                html  
    consolidateDMRs                         html  
    extractBinGRanges                       html  
    findDMR                                 html  
    findPMDs                                html  
    getCpos                                 html  
    getCposDensity                          html  
    mCsmoothing                             html  
    mapBSdata2GRanges                       html  
    meth.call                               html  
    methstats                               html  
    methylPipe-package                      html  
    plotMeth                                html  
    pool.reads                              html  
    process.hmc                             html  
    profileDNAmetBin                        html  
    splitChrs                               html  
    tabixdata2GR                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'methylPipe' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c R_init_methylPipe.c -o R_init_methylPipe.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c binning.c -o binning.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o methylPipe.dll tmp.def R_init_methylPipe.o binning.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/methylPipe.buildbin-libdir/methylPipe/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'methylPipe' as methylPipe_1.20.0.zip
* DONE (methylPipe)