Xiaoyuan Zhou
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/eegc |
| Branch: RELEASE_3_11 |
| Last Commit: fdd5e15 |
| Last Changed Date: 2020-04-27 15:01:05 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:30 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE eegc PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 530/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| eegc 1.14.0 Xiaoyuan Zhou
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: eegc |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/eegc_1.14.0.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL eegc_1.14.0.zip && rm eegc_1.14.0.tar.gz eegc_1.14.0.zip |
| StartedAt: 2020-10-16 18:49:45 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:51:25 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 99.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/eegc_1.14.0.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL eegc_1.14.0.zip && rm eegc_1.14.0.tar.gz eegc_1.14.0.zip
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install for i386
* installing *source* package 'eegc' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'eegc'
finding HTML links ... done
SandlerFPKM html
barplotEnrich html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/barplotEnrich.Rd:29: missing file link 'barplot.enrichResult'
cate.gene html
cate.ratio html
categorizeGene html
densityPlot html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/densityPlot.Rd:29: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
diffGene html
diffgene.genes html
dotPercentage html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/dotPercentage.Rd:32: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
eegc html
enrichment html
expr.filter html
functionEnrich html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/functionEnrich.Rd:17: file link 'org.Hs.eg.db' in package 'org.Hs.eg.db' does not exist and so has been treated as a topic
goenrich html
grnPlot html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/grnPlot.Rd:33: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/grnPlot.Rd:36: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/grnPlot.Rd:38: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/grnPlot.Rd:42: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
heatmapPlot html
human.gene html
human.grn html
human.tf html
markerScatter html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpKWBNzg/R.INSTALL25c86b475861/eegc/man/markerScatter.Rd:30: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
markers html
mouse.gene html
mouse.grn html
mouse.tf html
networkAnalyze html
tissueGenes html
tissueGroup html
** building package indices
** installing vignettes
'eegc.Rnw'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'eegc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'eegc' as eegc_1.14.0.zip
* DONE (eegc)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'eegc' successfully unpacked and MD5 sums checked