Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQRSTUVW[X]YZ

BUILD report for xps on machv2

This page was generated on 2020-04-11 15:00:38 -0400 (Sat, 11 Apr 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE xps PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1853/1861HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
xps 1.47.0
Christian Stratowa
Snapshot Date: 2020-04-10 16:45:24 -0400 (Fri, 10 Apr 2020)
URL: https://git.bioconductor.org/packages/xps
Branch: master
Last Commit: 9e92519
Last Changed Date: 2019-10-29 13:34:47 -0400 (Tue, 29 Oct 2019)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 ...NOT SUPPORTED...
machv2 macOS 10.14.6 Mojave / x86_64  ERROR [ ERROR ] skipped  skipped 

Summary

Package: xps
Version: 1.47.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data xps
StartedAt: 2020-04-10 19:48:03 -0400 (Fri, 10 Apr 2020)
EndedAt: 2020-04-10 19:48:07 -0400 (Fri, 10 Apr 2020)
EllapsedTime: 4.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data xps
###
##############################################################################
##############################################################################


* checking for file ‘xps/DESCRIPTION’ ... OK
* preparing ‘xps’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘xps’ ...
** using staged installation
checking for gcc... clang -mmacosx-version-min=10.13
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang -mmacosx-version-min=10.13 accepts -g... yes
checking for clang -mmacosx-version-min=10.13 option to accept ANSI C... none needed
checking how to run the C preprocessor... clang -mmacosx-version-min=10.13 -E
checking for gcc... (cached) clang -mmacosx-version-min=10.13
checking whether we are using the GNU C compiler... (cached) yes
checking whether clang -mmacosx-version-min=10.13 accepts -g... (cached) yes
checking for clang -mmacosx-version-min=10.13 option to accept ANSI C... (cached) none needed
checking for root-config... no

xps configuration error:

   You must set the shell variable ROOTSYS to the
   directory where ROOT resides and re-run R CMD INSTALL
   e.g., (using Bourne shell syntax):

      export ROOTSYS=/opt/root
      export "PATH=$ROOTSYS/bin:$PATH" 
      R CMD INSTALL xps

   Please consult the README file for more information

ERROR: configuration failed for package ‘xps’
* removing ‘/private/tmp/RtmpBioD8a/Rinstee9d15969fd5/xps’
      -----------------------------------
ERROR: package installation failed