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INSTALL report for DEXSeq on tokay2

This page was generated on 2020-04-15 03:20:14 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE DEXSeq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 30/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEXSeq 1.33.1
Alejandro Reyes
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/DEXSeq
Branch: master
Last Commit: ddfc944
Last Changed Date: 2020-02-27 16:26:27 -0400 (Thu, 27 Feb 2020)
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK 

Summary

Package: DEXSeq
Version: 1.33.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DEXSeq_1.33.1.tar.gz && rm -rf DEXSeq.buildbin-libdir && mkdir DEXSeq.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEXSeq.buildbin-libdir DEXSeq_1.33.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DEXSeq_1.33.1.zip && rm DEXSeq_1.33.1.tar.gz DEXSeq_1.33.1.zip
StartedAt: 2020-04-14 18:21:21 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 18:22:06 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 45.2 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DEXSeq_1.33.1.tar.gz && rm -rf DEXSeq.buildbin-libdir && mkdir DEXSeq.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEXSeq.buildbin-libdir DEXSeq_1.33.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DEXSeq_1.33.1.zip && rm DEXSeq_1.33.1.tar.gz DEXSeq_1.33.1.zip
###
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100 54698  100 54698    0     0   697k      0 --:--:-- --:--:-- --:--:--  763k

install for i386

* installing *source* package 'DEXSeq' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DEXSeq'
    finding HTML links ... done
    DEXSeq-defunct                          html  
    DEXSeq                                  html  
    DEXSeqDataSet                           html  
    DEXSeqHTML                              html  
    DEXSeqResults                           html  
    accessors                               html  
    counts                                  html  
    estimateDispersions                     html  
    estimateExonFoldChanges                 html  
    estimateSizeFactors                     html  
    methods-gr                              html  
    otherMethods                            html  
    perGeneQValue                           html  
    plotDEXSeq                              html  
    plotDispEsts                            html  
    plotMA                                  html  
    testForDEU                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DEXSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEXSeq' as DEXSeq_1.33.1.zip
* DONE (DEXSeq)
* installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library'
package 'DEXSeq' successfully unpacked and MD5 sums checked