Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:05:46 -0400 (Fri, 15 Oct 2021).

BUILD results for MSstatsTMTPTM on nebbiolo1

To the developers/maintainers of the MSstatsTMTPTM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSstatsTMTPTM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1216/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSstatsTMTPTM 1.2.0  (landing page)
Devon Kohler
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/MSstatsTMTPTM
git_branch: RELEASE_3_13
git_last_commit: 9326304
git_last_commit_date: 2021-05-19 12:56:40 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: MSstatsTMTPTM
Version: 1.2.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsTMTPTM
StartedAt: 2021-10-14 07:48:45 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 07:49:08 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 23.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsTMTPTM
###
##############################################################################
##############################################################################


* checking for file ‘MSstatsTMTPTM/DESCRIPTION’ ... OK
* preparing ‘MSstatsTMTPTM’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MSstatsTMTPTM.Rmd’ using rmarkdown
Quitting from lines 129-144 (MSstatsTMTPTM.Rmd) 
Error: processing vignette 'MSstatsTMTPTM.Rmd' failed with diagnostics:
Supplied 2 columns to be assigned 3 items. Please see NEWS for v1.12.2.
--- failed re-building ‘MSstatsTMTPTM.Rmd’

--- re-building ‘MSstatsTMTPTM.Workflow.rmd’ using rmarkdown

Attaching package: 'MSstats'

The following object is masked from 'package:grDevices':

    savePlot


Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Quitting from lines 93-107 (MSstatsTMTPTM.Workflow.rmd) 
Error: processing vignette 'MSstatsTMTPTM.Workflow.rmd' failed with diagnostics:
Supplied 2 columns to be assigned 3 items. Please see NEWS for v1.12.2.
--- failed re-building ‘MSstatsTMTPTM.Workflow.rmd’

SUMMARY: processing the following files failed:
  ‘MSstatsTMTPTM.Rmd’ ‘MSstatsTMTPTM.Workflow.rmd’

Error: Vignette re-building failed.
Execution halted