Katja Hebestreit
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/BiSeq |
| git_branch: RELEASE_3_14 |
| git_last_commit: 5d4449a |
| git_last_commit_date: 2021-10-26 12:07:58 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:15 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the BiSeq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BiSeq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 199/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BiSeq 1.34.0 (landing page) Katja Hebestreit
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BiSeq |
| Version: 1.34.0 |
| Command: rm -rf BiSeq.buildbin-libdir && mkdir BiSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=BiSeq.buildbin-libdir BiSeq_1.34.0.tar.gz |
| StartedAt: 2022-04-13 05:43:49 -0400 (Wed, 13 Apr 2022) |
| EndedAt: 2022-04-13 05:44:46 -0400 (Wed, 13 Apr 2022) |
| EllapsedTime: 56.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BiSeq_1.34.0.zip |
| PackageFileSize: 1.284 MiB |
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### Running command:
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### rm -rf BiSeq.buildbin-libdir && mkdir BiSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=BiSeq.buildbin-libdir BiSeq_1.34.0.tar.gz
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* installing *source* package 'BiSeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BiSeq'
finding HTML links ... done
BSraw-class html
finding level-2 HTML links ... done
BSrel-class html
DMRs html
annotateGRanges html
betaRegression html
betaResults html
betaResultsNull html
binomLikelihoodSmooth html
clusterSites html
clusterSitesToGR html
compareTwoSamples html
covBoxplots html
covStatistics html
estLocCor html
filterByCov html
filterBySharedRegions html
findDMRs html
globalTest html
limitCov html
logisticRegression html
makeVariogram html
plotBindingSites html
plotMeth html
plotMethMap html
plotSmoothMeth html
predictMeth html
predictedMeth html
promoters html
rawToRel html
readBismark html
rrbs html
smoothVariogram html
summarizeRegions html
testClusters html
trimClusters html
vario html
writeBED html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BiSeq' as BiSeq_1.34.0.zip
* DONE (BiSeq)